RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 AMELYQ99218 206 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 ANKRD60Q9BZ19 345 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 Q9H521 79 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 AMBNQ9NP70 447 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 UBAP1Q9NZ09 502 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 IKZF2Q9UKS7 526 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 DYSFO75923 2080 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 PLPP2O43688 288 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 FAM20BO75063 409 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 ALOX5APP20292 161 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 MYF6P23409 242 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 SLC15A1P46059 708 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 CXCR4P61073 352 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 GK2Q14410 553 aaPredicted RBP12.94□□□□□ -0.34
NUP50-219ENST00000497960 FAHD2BQ6P2I3 314 aaPredicted RBP12.94□□□□□ -0.34
NUP50-219ENST00000497960 KCTD18Q6PI47 426 aaPredicted RBP12.94□□□□□ -0.34
NUP50-219ENST00000497960 DRAM2Q6UX65 266 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 LRRN1Q6UXK5 716 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 NAA40Q86UY6 237 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.94□□□□□ -0.34
NUP50-219ENST00000497960 SPICQ8N5J4 248 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 OR10AD1Q8NGE0 317 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 SPRYD4Q8WW59 207 aaPredicted RBP12.94□□□□□ -0.34
NUP50-219ENST00000497960 ASB17Q8WXJ9 295 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 LGALS12Q96DT0 336 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 FAHD2AQ96GK7 314 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 CNBD2Q96M20 576 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 SLC30A2Q9BRI3 323 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 DCAF16Q9NXF7 216 aa12.94□□□□□ -0.34
NUP50-219ENST00000497960 PSMD9O00233 223 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 IGHV2-70P01814 119 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 OR2T7P0C7T2 308 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 OPRL1P41146 370 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 CX3CR1P49238 355 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 PRKXP51817 358 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 ZNF322Q6U7Q0 402 aaPredicted RBP12.93□□□□□ -0.34
NUP50-219ENST00000497960 KLHL36Q8N4N3 616 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 OR2T27Q8NH04 317 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 SPATA3Q8NHX4 192 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 MEGF10Q96KG7 1140 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 KCNJ15Q99712 375 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 GCM1Q9NP62 436 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 LRP12Q9Y561 859 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 PCDHGB1Q9Y5G3 927 aa12.93□□□□□ -0.34
NUP50-219ENST00000497960 A0A0G2JMP0 313 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 A0A0X1KG70 313 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 A0A1W2PQL4 384 aaPredicted RBP12.92□□□□□ -0.34
NUP50-219ENST00000497960 IRGMA1A4Y4 181 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 H0YL77 283 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 FADS2O95864 444 aaKnown RBP12.92□□□□□ -0.34
NUP50-219ENST00000497960 PNPP00491 289 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 ANXA2P07355 339 aaKnown RBP12.92□□□□□ -0.34
NUP50-219ENST00000497960 OTX1P32242 354 aaPredicted RBP12.92□□□□□ -0.34
NUP50-219ENST00000497960 MMP16P51512 607 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 RIDAP52758 137 aaKnown RBP12.92□□□□□ -0.34
NUP50-219ENST00000497960 PRSS12P56730 875 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 BTG1P62324 171 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 RAB40BQ12829 278 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 TMEM155Q4W5P6 130 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 SSX6Q7RTT6 188 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 FAM220AQ7Z4H9 259 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 BPIFB6Q8NFQ5 453 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 OR4M2Q8NGB6 313 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 FBLIM1Q8WUP2 373 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 OR8B4Q96RC9 309 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 MROQ9BYG7 248 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 SLC22A4Q9H015 551 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 EXOGQ9Y2C4 368 aaKnown RBP12.92□□□□□ -0.34
NUP50-219ENST00000497960 NOP16Q9Y3C1 178 aaKnown RBP12.92□□□□□ -0.34
NUP50-219ENST00000497960 N6AMT1Q9Y5N5 214 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 TANC2Q9HCD6 1990 aa12.92□□□□□ -0.34
NUP50-219ENST00000497960 DAPL1A0PJW8 107 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 GGT3PA6NGU5 568 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 LRRC30A6NM36 301 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 CD300LBA8K4G0 201 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 PRR32B1ATL7 298 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 F5H5P2 479 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 TMEM178BH3BS89 294 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 MLNRO43193 412 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 FOXH1O75593 365 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 APOC1P02654 83 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 HLA-DPB1P04440 258 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 KRT8P05787 483 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 MDH2P40926 338 aaKnown RBP12.91□□□□□ -0.34
NUP50-219ENST00000497960 EGR3Q06889 387 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 HNRNPA0Q13151 305 aaKnown RBP12.91□□□□□ -0.34
NUP50-219ENST00000497960 SCGB2A2Q13296 93 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 SNAI3Q3KNW1 292 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 DCAF12L2Q5VW00 463 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 LIPNQ5VXI9 398 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 RHOUQ7L0Q8 258 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 LRRC28Q86X40 367 aaPredicted RBP12.91□□□□□ -0.34
NUP50-219ENST00000497960 MUC20Q8N307 709 aaPredicted RBP12.91□□□□□ -0.34
NUP50-219ENST00000497960 OR52I1Q8NGK6 324 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 MRPL48Q96GC5 212 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms