RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 COL6A5A8TX70 2615 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 NPIPB7O75200 414 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 NIPSNAP2O75323 286 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 VAPBO95292 243 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 INSP01308 110 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 IFNB1P01574 187 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 IFNA16P05015 189 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 SERPIND1P05546 499 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 ABHD2P08910 425 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 RHOXF2BP0C7M4 288 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 H2AFXP16104 143 aaPredicted RBP3.06□□□□□ -1.92
MDM2-220ENST00000496959 CR1P17927 2039 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 TPSB2P20231 275 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 DEKP35659 375 aaKnown RBP3.06□□□□□ -1.92
MDM2-220ENST00000496959 ANP32AP39687 249 aaKnown RBP3.06□□□□□ -1.92
MDM2-220ENST00000496959 MARCKSL1P49006 195 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 HNMTP50135 292 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 SUCLG1P53597 346 aaKnown RBP3.06□□□□□ -1.92
MDM2-220ENST00000496959 MTTPP55157 894 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 BASP1P80723 227 aaKnown RBP3.06□□□□□ -1.92
MDM2-220ENST00000496959 REEP5Q00765 189 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 STX4Q12846 297 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 EIF4EBP1Q13541 118 aaPredicted RBP3.06□□□□□ -1.92
MDM2-220ENST00000496959 TPSAB1Q15661 275 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 CHRFAM7AQ494W8 412 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 CCSMST1Q4G0I0 132 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 ZNF470Q6ECI4 717 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 AGTRAPQ6RW13 159 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 FAM159AQ6UWV7 190 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 SSX8Q7RTT4 187 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 PRSS41Q7RTY9 318 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 LRRC70Q7Z2Q7 622 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 PEX26Q7Z412 305 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 TCAIMQ8N3R3 496 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 RPRMLQ8N4K4 120 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 FAM71E2Q8N5Q1 922 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 OR5T3Q8NGG3 340 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 PAQR8Q8TEZ7 354 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 SLC5A11Q8WWX8 675 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 UBE2E3Q969T4 207 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 SLC25A36Q96CQ1 311 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 SNF8Q96H20 258 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 SMR3AQ99954 134 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 SLC39A3Q9BRY0 314 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 DOHHQ9BU89 302 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 LYRM4Q9HD34 91 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 CHRAC1Q9NRG0 131 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 MS4A12Q9NXJ0 267 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 IFNKQ9P0W0 207 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 FETUBQ9UGM5 382 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 CFL2Q9Y281 166 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 NIPBLQ6KC79 2804 aaeCLIP3.06□□□□□ -1.92
MDM2-220ENST00000496959 ATRQ13535 2644 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 STAB1Q9NY15 2570 aa3.06□□□□□ -1.92
MDM2-220ENST00000496959 UQCRHLA0A096LP55 91 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 IQANK1A0A1B0GTG1 560 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 PSMB11A5LHX3 300 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 A6NDX4 124 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 A8MUA0 341 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 CTNSO60931 367 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 AKR7A3O95154 331 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 NDUFA7O95182 113 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 RCBTB2O95199 551 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 TTC4O95801 387 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 C1QAP02745 245 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 MLNP12872 115 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 TNNI3P19429 210 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 HNF1AP20823 631 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 CRYGSP22914 178 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 PTPN6P29350 595 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 COILP38432 576 aaPredicted RBP3.05□□□□□ -1.92
MDM2-220ENST00000496959 DNASE1L1P49184 302 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 CDK9P50750 372 aaKnown RBP3.05□□□□□ -1.92
MDM2-220ENST00000496959 ZNF136P52737 540 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 ARFIP1P53367 373 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 PAX5Q02548 391 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 C17orf67Q0P5P2 114 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 ZNF791Q3KP31 576 aaPredicted RBP3.05□□□□□ -1.92
MDM2-220ENST00000496959 PIGGQ5H8A4 983 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 BEX5Q5H9J7 111 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 ADAMTSL2Q86TH1 951 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 LINC01551Q86U37 167 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 VSTM4Q8IW00 320 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 CA13Q8N1Q1 262 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 Q8N9W7 124 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 ZSCAN4Q8NAM6 433 aaPredicted RBP3.05□□□□□ -1.92
MDM2-220ENST00000496959 OR2T33Q8NG76 320 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 CD200R1Q8TD46 325 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 ZMYND19Q96E35 227 aaPredicted RBP3.05□□□□□ -1.92
MDM2-220ENST00000496959 ARHGDIGQ99819 225 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 MED18Q9BUE0 208 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 OR8D2Q9GZM6 311 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 COMMD4Q9H0A8 199 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 RHBGQ9H310 441 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 ACTR8Q9H981 624 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 NTN4Q9HB63 628 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 LRTM1Q9HBL6 345 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 NGBQ9NPG2 151 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 FAIMQ9NVQ4 179 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 PHF11Q9UIL8 331 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms