RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PPP5D1E7EU14 171 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 PEX12O00623 359 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 AMBPP02760 352 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 CHRM2P08172 466 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 QDPRP09417 244 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 NID1P14543 1247 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 ERVFRD-1P60508 538 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 RAP1BP61224 184 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 ODF4Q2M2E3 257 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 SLC16A14Q7RTX9 510 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 ADPRHL1Q8NDY3 354 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 OR52N4Q8NGI2 321 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 NEK7Q8TDX7 302 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 CYB5D2Q8WUJ1 264 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 C22orf15Q8WYQ4 148 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 CNRIP1Q96F85 164 aaPredicted RBP8.09□□□□□ -1.11
HPS4-217ENST00000496385 ADAD1Q96M93 576 aaKnown RBP8.09□□□□□ -1.11
HPS4-217ENST00000496385 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 PCED1AQ9H1Q7 454 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 DEC1Q9P2X7 70 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 GPR132Q9UNW8 380 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 IER3IP1Q9Y5U9 82 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 TMEM14AQ9Y6G1 99 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 FIGNL2A6NMB9 653 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 FTCDNL1E5RQL4 147 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 NME2P1O60361 137 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 ERAL1O75616 437 aaKnown RBP8.09□□□□□ -1.11
HPS4-217ENST00000496385 KAT7O95251 611 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 ELFN1P0C7U0 828 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 OR5H8P0DN80 308 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 OR13C7P0DN81 318 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 FSTP19883 344 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 FCGR2CP31995 323 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 SSR2P43308 183 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 EIF2B1Q14232 305 aaKnown RBP8.09□□□□□ -1.11
HPS4-217ENST00000496385 ZNF260Q3ZCT1 412 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 TMEM215Q68D42 235 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 TMPPEQ6ZT21 453 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 LILRA3Q8N6C8 439 aaPredicted RBP8.09□□□□□ -1.11
HPS4-217ENST00000496385 SLC35G3Q8N808 338 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 NAXEQ8NCW5 288 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 OR10A7Q8NGE5 316 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 GLYATL1Q969I3 302 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 MS4A6EQ96DS6 147 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 ANGPTL4Q9BY76 406 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 OR11A1Q9GZK7 315 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 Q9N2J8 555 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 CHTOPQ9Y3Y2 248 aaKnown RBP8.09□□□□□ -1.11
HPS4-217ENST00000496385 ENTPD2Q9Y5L3 495 aa8.09□□□□□ -1.11
HPS4-217ENST00000496385 KIR2DL5BA0A0G2JN68 375 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 KIR2DL5BA0A0G2JPC4 375 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 RPP14O95059 124 aaKnown RBP8.08□□□□□ -1.12
HPS4-217ENST00000496385 MC3RP41968 323 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 CDKN1BP46527 198 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 SOX8P57073 446 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 LMAN2Q12907 356 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 HERPUD1Q15011 391 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 LINC01590Q5TEZ4 76 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 METRNLQ641Q3 311 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 TMEM220Q6QAJ8 160 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 CACUL1Q86Y37 369 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 ZNF679Q8IYX0 411 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 KIR2DL5AQ8N109 375 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 ZNF619Q8N2I2 560 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 MFSD9Q8NBP5 474 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 OR51L1Q8NGJ5 315 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 OR6K6Q8NGW6 343 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 FAM174AQ8TBP5 190 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 CMBLQ96DG6 245 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 ACY3Q96HD9 319 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 WFIKKN1Q96NZ8 548 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 ALG12Q9BV10 488 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 METTL8Q9H825 291 aaKnown RBP8.08□□□□□ -1.12
HPS4-217ENST00000496385 CDH20Q9HBT6 801 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 USP36Q9P275 1121 aaKnown RBP8.08□□□□□ -1.12
HPS4-217ENST00000496385 CKLFQ9UBR5 152 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 CD84Q9UIB8 345 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 CES1P1Q9UKY3 287 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 TGIF2-C20orf24A0A0A6YYL0 155 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 ELOA3DA6NLF2 546 aaPredicted RBP8.08□□□□□ -1.12
HPS4-217ENST00000496385 HSD17B6O14756 317 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 RAMP1O60894 148 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 ERGP11308 486 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 PNLIPP16233 465 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 P2RY1P47900 373 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 MMP16P51512 607 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 TMEM33P57088 247 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 PNRC1Q12796 327 aaPredicted RBP8.08□□□□□ -1.12
HPS4-217ENST00000496385 ELOA3BQ3SY89 546 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 FBXW9Q5XUX1 488 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 MFSD12Q6NUT3 480 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 ZNF774Q6NX45 483 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 SLC48A1Q6P1K1 146 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 CLEC18BQ6UXF7 455 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 TRAPPC6BQ86SZ2 158 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 CDC20BQ86Y33 519 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 ELOA3Q8NG57 546 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 OR51A2Q8NGJ7 313 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 OR10G4Q8NGN3 311 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms