RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 P2RY10O00398 339 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 CSF3P09919 207 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 TNFSF4P23510 183 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 ACKR3P25106 362 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 CRYBB2P43320 205 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 MVKQ03426 396 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 COMMD2Q86X83 199 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 ELMOD2Q8IZ81 293 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 PRSS35Q8N3Z0 413 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 FAM71F1Q96KD3 344 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-212ENST00000495497 C4orf36Q96KX1 117 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 PIMREGQ9BSJ6 248 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 REG4Q9BYZ8 158 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 EGLN1Q9GZT9 426 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 DLL4Q9NR61 685 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 ZNF275Q9NSD4 429 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-212ENST00000495497 IL19Q9UHD0 177 aa16.47■□□□□ 0.23
HDAC4-212ENST00000495497 IGHV1-69-2A0A0G2JMI3 117 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 A0A1B0GWJ7 208 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 H3BSH0 61 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 RP2O75695 350 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 IGLV3-1P01715 115 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 LIMS3P0CW19 117 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 LIMS4P0CW20 117 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 CFL1P23528 166 aaKnown RBP16.46■□□□□ 0.23
HDAC4-212ENST00000495497 ETV1P50549 477 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 OR8G1Q15617 311 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 OR8B8Q15620 311 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 WDR38Q5JTN6 314 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 MEGF10Q96KG7 1140 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 ADAT1Q9BUB4 502 aaKnown RBP16.46■□□□□ 0.23
HDAC4-212ENST00000495497 BPESC1Q9GZL8 116 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 MOB1AQ9H8S9 216 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 DCAF16Q9NXF7 216 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 MRPL15Q9P015 296 aaKnown RBP16.46■□□□□ 0.23
HDAC4-212ENST00000495497 RHBDD3Q9Y3P4 386 aa16.46■□□□□ 0.23
HDAC4-212ENST00000495497 ANKRD30BLA7E2S9 258 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 VWC2LB2RUY7 222 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 TACSTD2P09758 323 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 ACHEP22303 614 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 MYF6P23409 242 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 DDOSTP39656 456 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 NR4A2P43354 598 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 KIR3DL2P43630 455 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 NANOS3P60323 173 aaKnown RBP16.45■□□□□ 0.22
HDAC4-212ENST00000495497 MAB21L1Q13394 359 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 RIN1Q13671 783 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 KCTD20Q7Z5Y7 419 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 CCL17Q92583 94 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 PELI1Q96FA3 418 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 CHODLQ9H9P2 273 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 INPP5EQ9NRR6 644 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 CLEC2DQ9UHP7 191 aa16.45■□□□□ 0.22
HDAC4-212ENST00000495497 A0A096LNT2 108 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 A0A1B0GTI1 187 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 NDUFS8O00217 210 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 SLC25A16P16260 332 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 GIFP27352 417 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 DCKP27707 260 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 ACTA2P62736 377 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 ACTG2P63267 376 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 MRPS11P82912 194 aaKnown RBP16.44■□□□□ 0.22
HDAC4-212ENST00000495497 ST3GAL4Q11206 333 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 C6orf141Q5SZD1 244 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 PRAMEF6Q5VXH4 476 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 RDH10Q8IZV5 341 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 ZNF420Q8TAQ5 688 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-212ENST00000495497 TMEM80Q96HE8 168 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 COX4I2Q96KJ9 171 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 JAM3Q9BX67 310 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 ANKRD60Q9BZ19 345 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 PLCXD1Q9NUJ7 323 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 PSORS1C1Q9UIG5 152 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 ZNF391Q9UJN7 358 aa16.44■□□□□ 0.22
HDAC4-212ENST00000495497 DIMT1Q9UNQ2 313 aaKnown RBP16.44■□□□□ 0.22
HDAC4-212ENST00000495497 IRGMA1A4Y4 181 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 ZNF850A8MQ14 1090 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 E9PI62 339 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 PPIHO43447 177 aaKnown RBP16.43■□□□□ 0.22
HDAC4-212ENST00000495497 GMDSO60547 372 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 HTR1AP08908 422 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 TNFRSF1AP19438 455 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 HSPA13P48723 471 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 SRP9P49458 86 aaKnown RBP16.43■□□□□ 0.22
HDAC4-212ENST00000495497 HFEQ30201 348 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 AVPI1Q5T686 147 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 AHSA2Q719I0 299 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 SYS1Q8N2H4 156 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 CSNK2A3Q8NEV1 391 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 OR2G2Q8NGZ5 317 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 PIGCQ92535 297 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 MRPL48Q96GC5 212 aaKnown RBP16.43■□□□□ 0.22
HDAC4-212ENST00000495497 C18orf12Q96KH6 178 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 SMR3AQ99954 134 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 PAPOLGQ9BWT3 736 aaKnown RBP16.43■□□□□ 0.22
HDAC4-212ENST00000495497 SLC22A4Q9H015 551 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 FRRS1LQ9P0K9 344 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 PIGLQ9Y2B2 252 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 PCDHGB5Q9Y5G0 923 aa16.43■□□□□ 0.22
HDAC4-212ENST00000495497 CHD3Q12873 2000 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms