RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 A0A1B0GW55 424 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 ARPC3O15145 178 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DUX4L2P0CJ85 424 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DUX4L3P0CJ86 424 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DUX4L4P0CJ87 422 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DUX4L5P0CJ88 424 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DUX4L6P0CJ89 424 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DUX4L7P0CJ90 424 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 RHCEP18577 417 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 SAA4P35542 130 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 SLC7A2P52569 658 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DBPQ10586 325 aaPredicted RBP11.68□□□□□ -0.54
VARS-228ENST00000495010 KLRD1Q13241 179 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 BLMHQ13867 455 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 NCR3LG1Q68D85 454 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 PGBD2Q6P3X8 592 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DUX4L9Q6RFH8 374 aaPredicted RBP11.68□□□□□ -0.54
VARS-228ENST00000495010 ZBTB46Q86UZ6 589 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 FAM216BQ8N7L0 139 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 OR2T6Q8NHC8 308 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 RCN3Q96D15 328 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 MAP6Q96JE9 813 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 CLPTM1LQ96KA5 538 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 COPS4Q9BT78 406 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 DCTN5Q9BTE1 182 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 OR52D1Q9H346 318 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 FN3KQ9H479 309 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.68□□□□□ -0.54
VARS-228ENST00000495010 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 GMPR2Q9P2T1 348 aaKnown RBP11.68□□□□□ -0.54
VARS-228ENST00000495010 DUX4Q9UBX2 424 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 PRPF19Q9UMS4 504 aaKnown RBP11.68□□□□□ -0.54
VARS-228ENST00000495010 FOXJ3Q9UPW0 622 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 SIGLEC9Q9Y336 463 aa11.68□□□□□ -0.54
VARS-228ENST00000495010 NKX6-3A6NJ46 265 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
VARS-228ENST00000495010 H3BUX3 64 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 TBX1O43435 398 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 XRCC2O43543 280 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 XPNPEP2O43895 674 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 POU1F1P28069 291 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 DDOSTP39656 456 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 PRKXP51817 358 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 UBE2E1P51965 193 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 EFNB2P52799 333 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 ACSM1Q08AH1 577 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 SF3A3Q12874 501 aaKnown RBP eCLIP11.67□□□□□ -0.542e-7■■■■■ 27.2
VARS-228ENST00000495010 LY6EQ16553 131 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 SLC15A3Q8IY34 581 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 PNKDQ8N490 385 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 KLHDC1Q8N7A1 406 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 DTX3Q8N9I9 347 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 SDR9C7Q8NEX9 313 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 OR4S1Q8NGB4 309 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 OR51G2Q8NGK0 314 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 OR9Q1Q8NGQ5 310 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 C12orf43Q96C57 262 aaKnown RBP11.67□□□□□ -0.54
VARS-228ENST00000495010 RAB18Q9NP72 206 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 ADA2Q9NZK5 511 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 CAPN7Q9Y6W3 813 aa11.67□□□□□ -0.54
VARS-228ENST00000495010 A0A1W2PQ09 198 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 OR6C68A6NDL8 312 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 ACOT8O14734 319 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 IDH3BO43837 385 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 TIPRLO75663 272 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 VSIG10L2P0DP72 767 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 SLC2A1P11166 492 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 RPS27P42677 84 aaKnown RBP11.66□□□□□ -0.54
VARS-228ENST00000495010 KIR2DS4P43632 304 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 DLX1P56177 255 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 GMFBP60983 142 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 ELF3P78545 371 aaPredicted RBP11.66□□□□□ -0.54
VARS-228ENST00000495010 SEC23BQ15437 767 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 Q8N7P7 452 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 BEND2Q8NDZ0 799 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 PROKR2Q8NFJ6 384 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 OR1M1Q8NGA1 313 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 SSX3Q99909 188 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 TOR3AQ9H497 397 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 METTL8Q9H825 291 aaKnown RBP11.66□□□□□ -0.54
VARS-228ENST00000495010 CENPMQ9NSP4 180 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 NECAP2Q9NVZ3 263 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 MRPL22Q9NWU5 206 aaKnown RBP11.66□□□□□ -0.54
VARS-228ENST00000495010 NDUFAF4Q9P032 175 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 SF3B6Q9Y3B4 125 aaKnown RBP11.66□□□□□ -0.54
VARS-228ENST00000495010 MAB21L2Q9Y586 359 aa11.66□□□□□ -0.54
VARS-228ENST00000495010 PLXNB1O43157 2135 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 TVP23AA6NH52 213 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 M0R1W7 72 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 DIRAS1O95057 198 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 NCK1P16333 377 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 NDUFB7P17568 137 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 PYCR1P32322 319 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 GNALP38405 381 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 GSK3BP49841 420 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 SMIM11AP58511 58 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 CSNK2BP67870 215 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.65□□□□□ -0.54
VARS-228ENST00000495010 TIGD6Q17RP2 521 aa11.65□□□□□ -0.54
VARS-228ENST00000495010 NSUN5P1Q3KNT7 163 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms