RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 IRF2P14316 349 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 EIF2B1Q14232 305 aaKnown RBP9.65□□□□□ -0.86
VTI1A-208ENST00000494728 TRIM25Q14258 630 aaKnown RBP9.65□□□□□ -0.86
VTI1A-208ENST00000494728 ERI1Q8IV48 349 aaKnown RBP9.65□□□□□ -0.86
VTI1A-208ENST00000494728 TIGD4Q8IY51 512 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 LINC00471Q8N535 108 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 OR6N2Q8NGY6 317 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 SGK3Q96BR1 496 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 ZMYND19Q96E35 227 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-208ENST00000494728 REEP6Q96HR9 211 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 NSL1Q96IY1 281 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 PLEKHA8Q96JA3 519 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 TECTBQ96PL2 329 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 FEVQ99581 238 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 ABHD6Q9BV23 337 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 ZNF747Q9BV97 191 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 MARCH7Q9H992 704 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 OOEPA6NGQ2 149 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 RIIAD1A6NNX1 92 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 ENSAO43768 121 aaKnown RBP9.64□□□□□ -0.87
VTI1A-208ENST00000494728 SELENOFO60613 162 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 LHBP01229 141 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 TFF1P04155 84 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 ANXA2P07355 339 aaKnown RBP9.64□□□□□ -0.87
VTI1A-208ENST00000494728 ZNF3P17036 446 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 MDKP21741 143 aaPredicted RBP9.64□□□□□ -0.87
VTI1A-208ENST00000494728 OMGP23515 440 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 CPT2P23786 658 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 CFHR2P36980 270 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 OPRL1P41146 370 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 ZNF121P58317 390 aaPredicted RBP9.64□□□□□ -0.87
VTI1A-208ENST00000494728 TAF13Q15543 124 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 OR8B8Q15620 311 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 GFOD2Q3B7J2 385 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 FAM57BQ71RH2 274 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 RNF133Q8WVZ7 376 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 ASB9Q96DX5 294 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 PCGF1Q9BSM1 259 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 SLC22A4Q9H015 551 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 SIRPDQ9H106 197 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 MUC13Q9H3R2 512 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 UNKLQ9H9P5 680 aaKnown RBP9.64□□□□□ -0.87
VTI1A-208ENST00000494728 BAIAP2Q9UQB8 552 aa9.64□□□□□ -0.87
VTI1A-208ENST00000494728 hCG_1807616A0A1W2PRN6 198 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 A6NLC8 198 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 PRR32B1ATL7 298 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 ZNF879B4DU55 563 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 XRCC2O43543 280 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 GLCEO94923 617 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 RAP2AP10114 183 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 SELLP14151 372 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 AMY2BP19961 511 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 CALB2P22676 271 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 ACKR3P25106 362 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 GSTT1P30711 240 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 GRK5P34947 590 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 MNAT1P51948 309 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 RELBQ01201 579 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 PRB3Q04118 309 aaPredicted RBP9.63□□□□□ -0.87
VTI1A-208ENST00000494728 SRSF4Q08170 494 aaKnown RBP9.63□□□□□ -0.87
VTI1A-208ENST00000494728 FOXL1Q12952 345 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 FAM98BQ52LJ0 330 aaKnown RBP9.63□□□□□ -0.87
VTI1A-208ENST00000494728 TEX36Q5VZQ5 186 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 WDR82Q6UXN9 313 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 CD300LDQ6UXZ3 194 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 ARHGAP24Q8N264 748 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 FAM216BQ8N7L0 139 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 BBS1Q8NFJ9 593 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 SGMS2Q8NHU3 365 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 TEX47Q8TBZ9 253 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 CANT1Q8WVQ1 401 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 SLC25A28Q96A46 364 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 OTULINQ96BN8 352 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 INTS14Q96SY0 518 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 PRDM13Q9H4Q3 707 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 ZMAT3Q9HA38 289 aaKnown RBP9.63□□□□□ -0.87
VTI1A-208ENST00000494728 BRD7Q9NPI1 651 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 TNFRSF19Q9NS68 423 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 RHBDD3Q9Y3P4 386 aa9.63□□□□□ -0.87
VTI1A-208ENST00000494728 CENPVL3A0A0U1RRI6 287 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 H3BN98 237 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 DVL1O14640 695 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 KCNAB3O43448 404 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 CST1P01037 141 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 IFNGP01579 166 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 HSD11B1P28845 292 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 NAA10P41227 235 aaPredicted RBP9.62□□□□□ -0.87
VTI1A-208ENST00000494728 MTNR1AP48039 350 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 GSK3AP49840 483 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 DLX1P56177 255 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 GRB2P62993 217 aaKnown RBP9.62□□□□□ -0.87
VTI1A-208ENST00000494728 TIGD6Q17RP2 521 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 WDR38Q5JTN6 314 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 PRR31Q5SQ13 230 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 GPR157Q5UAW9 335 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 PLBD1Q6P4A8 553 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 PDZD9Q8IXQ8 264 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 OR1M1Q8NGA1 313 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 GIPC3Q8TF64 312 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms