RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 GLCEO94923 617 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 GYPAP02724 150 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 PRTN3P24158 256 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 GRK5P34947 590 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 SLC15A1P46059 708 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 COMPP49747 757 aaPredicted RBP7.99□□□□□ -1.13
MSH5-218ENST00000494646 BLVRAP53004 296 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 HCCSP53701 268 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 ZNF121P58317 390 aaPredicted RBP7.99□□□□□ -1.13
MSH5-218ENST00000494646 KLHL12Q53G59 568 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 TMEM236Q5W0B7 351 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 PLBD1Q6P4A8 553 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 BRD3OSQ6XYD6 125 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 DCDC5Q6ZRR9 648 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 DOK3Q7L591 496 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 NLRC3Q7RTR2 1065 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 SLC16A9Q7RTY1 509 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.99□□□□□ -1.13
MSH5-218ENST00000494646 OR8S1Q8NH09 359 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 THEM6Q8WUY1 208 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 REEP6Q96HR9 211 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 PGAM5Q96HS1 289 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 C1orf147Q96MC9 270 aaPredicted RBP7.99□□□□□ -1.13
MSH5-218ENST00000494646 MRPL15Q9P015 296 aaKnown RBP7.99□□□□□ -1.13
MSH5-218ENST00000494646 ERVK-18Q9QC07 812 aa7.99□□□□□ -1.13
MSH5-218ENST00000494646 TRAV40A0A0B4J280 105 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.98□□□□□ -1.13
MSH5-218ENST00000494646 MDFIC2A0A1B0GVS7 189 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 AQP12BA6NM10 295 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 C22orf46C9J442 243 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 PRR23D1E9PI22 279 aaPredicted RBP7.98□□□□□ -1.13
MSH5-218ENST00000494646 LGALS8O00214 317 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 TNFRSF13BO14836 293 aaPredicted RBP7.98□□□□□ -1.13
MSH5-218ENST00000494646 GYG2O15488 501 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 XRCC2O43543 280 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 SELENOFO60613 162 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 E2F6O75461 281 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 FSTL3O95633 263 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 H2BFMP0C1H6 154 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 PRR23D2P0DMB1 279 aaPredicted RBP7.98□□□□□ -1.13
MSH5-218ENST00000494646 OSMP13725 252 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 EGR1P18146 543 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 CPT2P23786 658 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 DDOSTP39656 456 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 PSMB10P40306 273 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 FGF12P61328 243 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 GRB2P62993 217 aaKnown RBP7.98□□□□□ -1.13
MSH5-218ENST00000494646 ELF3P78545 371 aaPredicted RBP7.98□□□□□ -1.13
MSH5-218ENST00000494646 CBX1P83916 185 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 CDK5Q00535 292 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 AWAT1Q58HT5 328 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 SHFQ7M4L6 423 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 TRPM8Q7Z2W7 1104 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 CPOQ8IVL8 374 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 AQP12AQ8IXF9 295 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 C11orf53Q8IXP5 236 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 TIGD4Q8IY51 512 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 GCSAMQ8N6F7 178 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 SPERTQ8NA61 448 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 RNF133Q8WVZ7 376 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 DACT3Q96B18 629 aaPredicted RBP7.98□□□□□ -1.13
MSH5-218ENST00000494646 SEH1LQ96EE3 360 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 PCGF1Q9BSM1 259 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 TOR3AQ9H497 397 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 ZNF556Q9HAH1 456 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 TNFRSF19Q9NS68 423 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 C14orf119Q9NWQ9 140 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 CTSZQ9UBR2 303 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 NOP16Q9Y3C1 178 aaKnown RBP7.98□□□□□ -1.13
MSH5-218ENST00000494646 RHBDD3Q9Y3P4 386 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 PCDHGB1Q9Y5G3 927 aa7.98□□□□□ -1.13
MSH5-218ENST00000494646 TRAV38-1A0A0B4J264 116 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 OOEPA6NGQ2 149 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 DNAJC9-AS1A6NH13 148 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 PSMD9O00233 223 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 PTBP3O95758 552 aaKnown RBP7.97□□□□□ -1.13
MSH5-218ENST00000494646 LHBP01229 141 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 HMGN1P05114 100 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 LYNP07948 512 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 SFTPBP07988 381 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 HKR1P10072 659 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 PAICSP22234 425 aaKnown RBP7.97□□□□□ -1.13
MSH5-218ENST00000494646 GNALP38405 381 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 NAA10P41227 235 aaPredicted RBP7.97□□□□□ -1.13
MSH5-218ENST00000494646 GSK3AP49840 483 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 GMFBP60983 142 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 RPS7P62081 194 aaKnown RBP7.97□□□□□ -1.13
MSH5-218ENST00000494646 ARF6P62330 175 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 FLOT2Q14254 428 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 SLC9A3R2Q15599 337 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 KCNJ8Q15842 424 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 RUSC1-AS1Q66K80 236 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 PRSS45Q7RTY3 260 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 WDR86Q86TI4 376 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 FGFRL1Q8N441 504 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 BBS1Q8NFJ9 593 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 OR1M1Q8NGA1 313 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 OTOSQ8NHW6 89 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 BCAS4Q8TDM0 211 aa7.97□□□□□ -1.13
MSH5-218ENST00000494646 LRRC29Q8WV35 223 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 290.1 ms