RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 BOLLQ8N9W6 283 aaKnown RBP27.79■■■□□ 2.04
CBX4-203ENST00000494546 OR8S1Q8NH09 359 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 ZNF418Q8TF45 676 aaPredicted RBP27.79■■■□□ 2.04
CBX4-203ENST00000494546 NEIL1Q96FI4 390 aaPredicted RBP27.79■■■□□ 2.04
CBX4-203ENST00000494546 LAMP5Q9UJQ1 280 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 INSIG2Q9Y5U4 225 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 hCG_38984A0A1B0GV85 526 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 PTBP3O95758 552 aaKnown RBP27.78■■■□□ 2.04
CBX4-203ENST00000494546 MRPL3P09001 348 aaKnown RBP27.78■■■□□ 2.04
CBX4-203ENST00000494546 ZNF12P17014 697 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 CPT2P23786 658 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 GNB2P62879 340 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 MZT1Q08AG7 82 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 NLRC3Q7RTR2 1065 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 ZDHHC13Q8IUH4 622 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 PLPP7Q8NBV4 271 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 OR8B3Q8NGG8 313 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 OR8B2Q96RD0 313 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 C14orf119Q9NWQ9 140 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 C1orf123Q9NWV4 160 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 AUP1Q9Y679 476 aa27.78■■■□□ 2.04
CBX4-203ENST00000494546 A0A0A6YYJ9 748 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 A6NLC8 198 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 PRKYO43930 277 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 CIB2O75838 187 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 VENTXO95231 258 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 GSK3AP49840 483 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 LRTOMTQ8WZ04 291 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 TEAD3Q99594 435 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 PRRG3Q9BZD7 231 aa27.77■■■□□ 2.04
CBX4-203ENST00000494546 CCDC182A6NF36 153 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 ALOX5APP20292 161 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 LCN1P1Q5VSP4 162 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 SFRP4Q6FHJ7 346 aaPredicted RBP27.76■■■□□ 2.03
CBX4-203ENST00000494546 LYPD2Q6UXB3 125 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 DCDC5Q6ZRR9 648 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 KRT77Q7Z794 578 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 DUS3LQ96G46 650 aaKnown RBP27.76■■■□□ 2.03
CBX4-203ENST00000494546 MRI1Q9BV20 369 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 YIPF3Q9GZM5 350 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 RGCCQ9H4X1 137 aa27.76■■■□□ 2.03
CBX4-203ENST00000494546 M0R129 80 aa27.75■■■□□ 2.03
CBX4-203ENST00000494546 FCGR1AP12314 374 aa27.75■■■□□ 2.03
CBX4-203ENST00000494546 PITPNBP48739 271 aa27.75■■■□□ 2.03
CBX4-203ENST00000494546 ZNF826PQ6ZT77 177 aa27.75■■■□□ 2.03
CBX4-203ENST00000494546 LRP12Q9Y561 859 aa27.75■■■□□ 2.03
CBX4-203ENST00000494546 hCG_1807616A0A1W2PRN6 198 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 C3orf80F5H4A9 247 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 FSHBP01225 129 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 EPHA2P29317 976 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 CD80P33681 288 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 PSMA6P60900 246 aaKnown RBP27.74■■■□□ 2.03
CBX4-203ENST00000494546 OR8B8Q15620 311 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 ARMCX4Q5H9R4 360 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 KDM4DQ6B0I6 523 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 BPIFB2Q8N4F0 458 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 C22orf15Q8WYQ4 148 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 SLC6A7Q99884 636 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 PAPOLGQ9BWT3 736 aaKnown RBP27.74■■■□□ 2.03
CBX4-203ENST00000494546 GABARAPL1Q9H0R8 117 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 NIPAL2Q9H841 368 aa27.74■■■□□ 2.03
CBX4-203ENST00000494546 PSMD9O00233 223 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 GNALP38405 381 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 SLX4IPQ5VYV7 408 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 BCDIN3DQ7Z5W3 292 aaKnown RBP27.73■■■□□ 2.03
CBX4-203ENST00000494546 CSNK2A3Q8NEV1 391 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 SEMA6DQ8NFY4 1073 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 SEMA6AQ9H2E6 1030 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 PPP1R3EQ9H7J1 279 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 CLN8Q9UBY8 286 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 RHBDD3Q9Y3P4 386 aa27.73■■■□□ 2.03
CBX4-203ENST00000494546 LGALS8O00214 317 aa27.72■■■□□ 2.03
CBX4-203ENST00000494546 KCTD18Q6PI47 426 aaPredicted RBP27.72■■■□□ 2.03
CBX4-203ENST00000494546 BTNL3Q6UXE8 466 aa27.72■■■□□ 2.03
CBX4-203ENST00000494546 TCEANCQ8N8B7 351 aa27.72■■■□□ 2.03
CBX4-203ENST00000494546 OR8B12Q8NGG6 310 aa27.72■■■□□ 2.03
CBX4-203ENST00000494546 H2AFY2Q9P0M6 372 aaPredicted RBP27.72■■■□□ 2.03
CBX4-203ENST00000494546 STAB1Q9NY15 2570 aa27.71■■■□□ 2.03
CBX4-203ENST00000494546 ZAR1LA6NP61 321 aa27.71■■■□□ 2.03
CBX4-203ENST00000494546 KCNJ8Q15842 424 aa27.71■■■□□ 2.03
CBX4-203ENST00000494546 WDR86Q86TI4 376 aa27.71■■■□□ 2.03
CBX4-203ENST00000494546 SUCNR1Q9BXA5 334 aa27.71■■■□□ 2.03
CBX4-203ENST00000494546 TTTY10Q9BZA0 68 aa27.71■■■□□ 2.03
CBX4-203ENST00000494546 IGHV2-70DA0A0C4DH43 119 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 FPR2P25090 351 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 HILS1P60008 231 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 PAX2Q02962 417 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 PAX8Q06710 450 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 SNCBQ16143 134 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 C12orf73Q69YU5 71 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 USP43Q70EL4 1123 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 MEPCEQ7L2J0 689 aaKnown RBP27.7■■■□□ 2.02
CBX4-203ENST00000494546 FTMTQ8N4E7 242 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP27.7■■■□□ 2.02
CBX4-203ENST00000494546 TMEM163Q8TC26 289 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 RAB40AQ8WXH6 277 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 LYZL4Q96KX0 146 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 CNN2Q99439 309 aaKnown RBP27.7■■■□□ 2.02
CBX4-203ENST00000494546 MROQ9BYG7 248 aa27.7■■■□□ 2.02
CBX4-203ENST00000494546 ENOPH1Q9UHY7 261 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms