RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 PPP1R3EQ9H7J1 279 aa10.43□□□□□ -0.74
SKA1-205ENST00000494518 SIRT7Q9NRC8 400 aa10.43□□□□□ -0.74
SKA1-205ENST00000494518 ZNF446Q9NWS9 450 aa10.43□□□□□ -0.74
SKA1-205ENST00000494518 MRPL15Q9P015 296 aaKnown RBP10.43□□□□□ -0.74
SKA1-205ENST00000494518 KCNG2Q9UJ96 466 aa10.43□□□□□ -0.74
SKA1-205ENST00000494518 COMMD3-BMI1R4GMX3 469 aa10.43□□□□□ -0.74
SKA1-205ENST00000494518 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.42□□□□□ -0.74
SKA1-205ENST00000494518 TIMM23O14925 209 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 TFF1P04155 84 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 FABP3P05413 133 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 CLUP10909 449 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 IFNGR2P38484 337 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 PPP1R8Q12972 351 aaKnown RBP10.42□□□□□ -0.74
SKA1-205ENST00000494518 TSPAN31Q12999 210 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 KLRD1Q13241 179 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 PDCD1Q15116 288 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 PCK2Q16822 640 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 GFOD2Q3B7J2 385 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 WDR38Q5JTN6 314 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 DRAM2Q6UX65 266 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 ZDHHC21Q8IVQ6 265 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 FAM216BQ8N7L0 139 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 SLC37A3Q8NCC5 494 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 OR52L1Q8NGH7 329 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 OR8D4Q8NGM9 314 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 OR2T4Q8NH00 348 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 OR8S1Q8NH09 359 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 DYRK2Q92630 601 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 SLAMF6Q96DU3 332 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 CMTM5Q96DZ9 223 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 DDOQ99489 341 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 ELAC2Q9BQ52 826 aaKnown RBP10.42□□□□□ -0.74
SKA1-205ENST00000494518 GORASP2Q9H8Y8 452 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 CDH10Q9Y6N8 788 aa10.42□□□□□ -0.74
SKA1-205ENST00000494518 ARPC2O15144 300 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 NDUFA2O43678 99 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 IDH3BO43837 385 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 ANXA2P07355 339 aaKnown RBP10.41□□□□□ -0.74
SKA1-205ENST00000494518 SELLP14151 372 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 OTX1P32242 354 aaPredicted RBP10.41□□□□□ -0.74
SKA1-205ENST00000494518 IER3P46695 156 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 ENTPD1P49961 510 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 PROK1P58294 105 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 IKZF1Q13422 519 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 TAF9Q16594 264 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 HIST2H2BDQ6DRA6 164 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 Q6ZSV7 163 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 DPY19L4Q7Z388 723 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 C11orf53Q8IXP5 236 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 PNKDQ8N490 385 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 PLPP7Q8NBV4 271 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 OR5T2Q8NGG2 359 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 OR6K6Q8NGW6 343 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 FAM110DQ8TAY7 271 aaPredicted RBP10.41□□□□□ -0.74
SKA1-205ENST00000494518 NSMCE2Q96MF7 247 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 KCNJ15Q99712 375 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 BTBD10Q9BSF8 475 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 FAM107BQ9H098 131 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 MYLK2Q9H1R3 596 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 CNTD2Q9H8S5 307 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 TCF7L1Q9HCS4 588 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 TRIM36Q9NQ86 728 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 TBC1D23Q9NUY8 699 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 C14orf119Q9NWQ9 140 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 DNAJC27Q9NZQ0 273 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 MAGEL2Q9UJ55 1249 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 RPUSD1Q9UJJ7 312 aaKnown RBP10.41□□□□□ -0.74
SKA1-205ENST00000494518 FAM96BQ9Y3D0 163 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
SKA1-205ENST00000494518 PLXNB1O43157 2135 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 ANKRD30BLA7E2S9 258 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 ZNF593O00488 134 aaPredicted RBP10.4□□□□□ -0.74
SKA1-205ENST00000494518 ACOT8O14734 319 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 SOX14O95416 240 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 LHBP01229 141 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 CX3CR1P49238 355 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 GUCA2AQ02747 115 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 CRMP1Q14194 572 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 TIGD6Q17RP2 521 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 MICBQ29980 383 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 CDONQ4KMG0 1287 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 DHRS7BQ6IAN0 325 aaPredicted RBP10.4□□□□□ -0.74
SKA1-205ENST00000494518 WDR82Q6UXN9 313 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 FAM57BQ71RH2 274 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 SLC16A9Q7RTY1 509 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 LDLRAD3Q86YD5 345 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 SPERTQ8NA61 448 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 OR4C15Q8NGM1 316 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 OR4Q3Q8NH05 313 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 REEP6Q96HR9 211 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 BRD7Q9NPI1 651 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 SNTG1Q9NSN8 517 aa10.4□□□□□ -0.74
SKA1-205ENST00000494518 DHRS12A0PJE2 317 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 SLC22A31A6NKX4 558 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 ZNF878C9JN71 531 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.39□□□□□ -0.75
SKA1-205ENST00000494518 TNFRSF11BO00300 401 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 XRCC2O43543 280 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms