RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 PPP1R3EQ9H7J1 279 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 YY1AP1Q9H869 796 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 TVP23BQ9NYZ1 205 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF319Q9P2F9 582 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 PPIAL4AQ9Y536 164 aa8.92□□□□□ -0.98
COL6A3-214ENST00000493608 LRRC30A6NM36 301 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 IFNL4K9M1U5 179 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 GMDSO60547 372 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 HMGN1P05114 100 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 H2BFMP0C1H6 154 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 GATA3P23771 443 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 CD80P33681 288 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 SLC15A1P46059 708 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 DAPP51397 102 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 RPS7P62081 194 aaKnown RBP8.91□□□□□ -0.98
COL6A3-214ENST00000493608 GRB2P62993 217 aaKnown RBP8.91□□□□□ -0.98
COL6A3-214ENST00000493608 FAM3AP98173 230 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 BNIP1Q12981 228 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF154Q13106 437 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 TIGD6Q17RP2 521 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF181Q2M3W8 571 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 ESCO2Q56NI9 601 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF826PQ6ZT77 177 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 SHFQ7M4L6 423 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 SLC16A9Q7RTY1 509 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-214ENST00000493608 C1orf87Q8N0U7 546 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 OR11L1Q8NGX0 322 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF418Q8TF45 676 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-214ENST00000493608 RNF133Q8WVZ7 376 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 REEP6Q96HR9 211 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 PLEKHA8Q96JA3 519 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 MARCH7Q9H992 704 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 KIF17Q9P2E2 1029 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 MIOXQ9UGB7 285 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 AUP1Q9Y679 476 aa8.91□□□□□ -0.98
COL6A3-214ENST00000493608 IGHV3OR16-10A0A075B7F0 116 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 PSMD9O00233 223 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 XRCC2O43543 280 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 MITFO75030 526 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-214ENST00000493608 LYNP07948 512 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF12P17014 697 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 OPRL1P41146 370 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 CRISP1P54107 249 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 GNB2P62879 340 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 APOFQ13790 326 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 SNAPC1Q16533 368 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 ZNF404Q494X3 552 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 LRRN1Q6UXK5 716 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 PRSS45Q7RTY3 260 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 BCDIN3DQ7Z5W3 292 aaKnown RBP8.9□□□□□ -0.98
COL6A3-214ENST00000493608 BCL6BQ8N143 479 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-214ENST00000493608 CELF2-AS1Q8N7Q2 184 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 SEMA6DQ8NFY4 1073 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 OTOSQ8NHW6 89 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 Q8TCH9 128 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 UTP4Q969X6 686 aaKnown RBP8.9□□□□□ -0.98
COL6A3-214ENST00000493608 NEIL1Q96FI4 390 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-214ENST00000493608 PGAM5Q96HS1 289 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-214ENST00000493608 SLC22A4Q9H015 551 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 TOR3AQ9H497 397 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 FN3KRPQ9HA64 309 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 PAPOLBQ9NRJ5 636 aaKnown RBP8.9□□□□□ -0.98
COL6A3-214ENST00000493608 C1orf123Q9NWV4 160 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 RNF7Q9UBF6 113 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 OR5V1Q9UGF6 321 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 KLHDC2Q9Y2U9 406 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 POLR3KQ9Y2Y1 108 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-214ENST00000493608 INSIG2Q9Y5U4 225 aa8.9□□□□□ -0.98
COL6A3-214ENST00000493608 A0A0A6YYJ9 748 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 PPIAL4CA0A0B4J2A2 164 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 hCG_1807616A0A1W2PRN6 198 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 A6NLC8 198 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 ANKRD30BLA7E2S9 258 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 A8MXK9 166 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 M0R129 80 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 EREGO14944 169 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 FSHBP01225 129 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 MRPL3P09001 348 aaKnown RBP8.89□□□□□ -0.99
COL6A3-214ENST00000493608 HOXB6P17509 224 aaKnown RBP8.89□□□□□ -0.99
COL6A3-214ENST00000493608 PITPNBP48739 271 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 SCGB2A2Q13296 93 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 PTGES3Q15185 160 aaKnown RBP8.89□□□□□ -0.99
COL6A3-214ENST00000493608 OR8B8Q15620 311 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 ARMCX4Q5H9R4 360 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 KLF17Q5JT82 389 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-214ENST00000493608 AMIGO2Q86SJ2 522 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 BPIFB2Q8N4F0 458 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 TEX29Q8N6K0 151 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 OR8B3Q8NGG8 313 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 OR8S1Q8NH09 359 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 OR5K1Q8NHB7 308 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 ERGIC1Q969X5 290 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 SPSB4Q96A44 273 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 OR8B2Q96RD0 313 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 TTTY10Q9BZA0 68 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 OR10A2Q9H208 303 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 MMADHCQ9H3L0 296 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms