RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	CCDC80	Q76M96	950 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	OR2W3	Q7Z3T1	314 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	FUNDC1	Q8IVP5	155 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	KLHL30-AS1	Q8NEE0	82 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	OR2T12	Q8NG77	320 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	OR6T1	Q8NGN1	323 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	OR2AJ1	Q8NGZ0	328 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	OR13G1	Q8NGZ3	307 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	TMEM54	Q969K7	222 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	MCHR2	Q969V1	340 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	MCUR1	Q96AQ8	359 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	BPIFA2	Q96DR5	249 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	RNFT2	Q96EX2	444 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF583	Q96ND8	569 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	EBF4	Q9BQW3	602 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	ALG12	Q9BV10	488 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	NSRP1	Q9H0G5	558 aa	Known RBP	4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	TXNIP	Q9H3M7	391 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	IKZF5	Q9H5V7	419 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	ABCB10	Q9NRK6	738 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	UFSP2	Q9NUQ7	469 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	TAS2R5	Q9NYW4	299 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC25A37	Q9NYZ2	338 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	SLAMF8	Q9P0V8	285 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	AURKC	Q9UQB9	309 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	TMEM5	Q9Y2B1	443 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	POLR1D	Q9Y2S0	133 aa		4.27	□□□□□ -1.73
SEC13-219	ENST00000492602	SORL1	Q92673	2214 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	TRAV38-1	A0A0B4J264	116 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602		A0A1B0GVY2	172 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	OOEP	A6NGQ2	149 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	NPIPB13	A6NJU9	1138 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	NPIPB4	C9JG80	1138 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	CCL24	O00175	119 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	MLNR	O43193	412 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	EDF1	O60869	148 aa	Known RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM20B	O75063	409 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	TRMU	O75648	421 aa	Known RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF682	O95780	498 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	ABHD16A	O95870	558 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	LPL	P06858	475 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	CST2	P09228	141 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	ASAH2B	P0C7U1	165 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	PGA4	P0DJD7	388 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	PGA3	P0DJD8	388 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	IFI30	P13284	250 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	MSR1	P21757	451 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	CRABP1	P29762	137 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RRM2	P31350	389 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	AQP2	P41181	271 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	CEBPD	P49716	269 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RPS6KA3	P51812	740 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	MNAT1	P51948	309 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RAD23A	P54725	363 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	CTXN1	P60606	82 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	ERVK-25	P63136	954 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	PSG4	Q00888	419 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	GUCY1A3	Q02108	690 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RPL18	Q07020	188 aa	Known RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	SCRN3	Q0VDG4	424 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	ECH1	Q13011	328 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	TOP3A	Q13472	1001 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	PIN1	Q13526	163 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	LAPTM4A	Q15012	233 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC36A3	Q495N2	470 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	LRRC23	Q53EV4	343 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	CYBRD1	Q53TN4	286 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	CLEC12A	Q5QGZ9	265 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM27B	Q5VT28	67 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	PRAMEF6	Q5VXH4	476 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	OTP	Q5XKR4	325 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	GPR139	Q6DWJ6	353 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	MAPKAPK5-AS1	Q8N8E1	139 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	NPEPL1	Q8NDH3	523 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC26A10	Q8NG04	563 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	OR8G5	Q8NG78	346 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	OR4D11	Q8NGI4	311 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RP9	Q8TA86	221 aa	Known RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602		Q8TCH9	128 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RPS4Y2	Q8TD47	263 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	PTP4A1	Q93096	173 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM162A	Q96A26	154 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	HAVCR1	Q96D42	359 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RAX2	Q96IS3	184 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF582	Q96NG8	517 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF347	Q96SE7	839 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	HCAR1	Q9BXC0	346 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	TMEM120A	Q9BXJ8	343 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RERGL	Q9H628	205 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	METTL8	Q9H825	291 aa	Known RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	TRIM36	Q9NQ86	728 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	RNF7	Q9UBF6	113 aa		4.26	□□□□□ -1.73
SEC13-219	ENST00000492602	IGKV1D-43	A0A0B4J1Z2	117 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602		A0A1W2PPL8	197 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	VGLL3	A8MV65	326 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	LYPD3	O95274	346 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms