RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 K7ENP7 123 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 LMX1BO60663 402 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 TGM6O95932 706 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 FAM157BP0CG42 384 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 TRAPPC2P0DI81 140 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 TRAPPC2BP0DI82 140 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 SLC6A1P30531 599 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 KIR2DL3P43628 341 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 PMP22Q01453 160 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 GPR176Q14439 515 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 PABPC1L2AQ5JQF8 200 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 INO80CQ6PI98 192 aaPredicted RBP13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 COLCA1Q6ZS62 124 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 NUFIP2Q7Z417 695 aaKnown RBP13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 UBE2J2Q8N2K1 259 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 PNLDC1Q8NA58 520 aaKnown RBP13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 SEMA6DQ8NFY4 1073 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 OR13C9Q8NGT0 318 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 BOD1Q96IK1 185 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 LYZL4Q96KX0 146 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 NEURL2Q9BR09 285 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 MARVELD1Q9BSK0 173 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 C1QTNF5Q9BXJ0 243 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 ATG5Q9H1Y0 275 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 CNTD2Q9H8S5 307 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 SCPEP1Q9HB40 452 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 N6AMT1Q9Y5N5 214 aa13.18□□□□□ -0.3
TMEM50A-205ENST00000491936 CIB4A0PJX0 185 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 ORC5O43913 435 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 C1QL1O75973 258 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 LCATP04180 440 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 PRB1P04280 392 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 SERPINA5P05154 406 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 CHRM2P08172 466 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 ABOP16442 354 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 PTGER4P35408 488 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 BTG1P62324 171 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 DGCR2P98153 550 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 TGFBR3Q03167 851 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 PLP2Q04941 152 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 RIPPLY1Q0D2K3 151 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 FAPQ12884 760 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 SNTB2Q13425 540 aaKnown RBP13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 MADCAM1Q13477 382 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 KLF9Q13886 244 aaPredicted RBP13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 C3AR1Q16581 482 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 AGAP6Q5VW22 663 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 NAA40Q86UY6 237 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 OR5AS1Q8N127 324 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 OR52N4Q8NGI2 321 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 SPSB4Q96A44 273 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 CREB3L1Q96BA8 519 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 SPSB1Q96BD6 273 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 NEDD4LQ96PU5 975 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 CHST5Q9GZS9 411 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 DPAGT1Q9H3H5 408 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 CGGBP1Q9UFW8 167 aaPredicted RBP13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 ZNF107Q9UII5 783 aaPredicted RBP13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 MED12Q93074 2177 aa13.17□□□□□ -0.3
TMEM50A-205ENST00000491936 COL6A6A6NMZ7 2263 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 LANCL1O43813 399 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 RBBP9O75884 186 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 IGHV3-9P01782 118 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 DBHP09172 617 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 CD3GP09693 182 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 PRKACBP22694 351 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 GDNFP39905 211 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 RAG2P55895 527 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 GUSBP1Q15486 140 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 EIF2S3LQ2VIR3 472 aaKnown RBP13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 FAM214BQ7L5A3 538 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 KRT74Q7RTS7 529 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 DTX3Q8N9I9 347 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 OR4D6Q8NGJ1 314 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 OR1K1Q8NGR3 316 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 AKR7LQ8NHP1 331 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 BCL2L2Q92843 193 aaPredicted RBP13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 FAM46BQ96A09 425 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 REEP6Q96HR9 211 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
TMEM50A-205ENST00000491936 ATMQ13315 3056 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 H7C417 338 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 J3QW42 95 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 ERVH48-1M5A8F1 160 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 SSX4O60224 188 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 CRHP06850 196 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 HCKP08631 526 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 CSF1P09603 554 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 HLA-DMAP28067 261 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 PRSS3P35030 304 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 FAUP35544 74 aaKnown RBP13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 QRFPP83859 136 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 CNN3Q15417 329 aaKnown RBP13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 SNAI3Q3KNW1 292 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 PLA1AQ53H76 456 aa13.15□□□□□ -0.3
TMEM50A-205ENST00000491936 KRTCAP3Q53RY4 240 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms