RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 UTS2O95399 124 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 CTXN2P0C2S0 81 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 CALM1P0DP23 149 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 CALM2P0DP24 149 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 CALM3P0DP25 149 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 CSNK2A2P19784 350 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 ARPC4P59998 168 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACTBP60709 375 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 RAB14P61106 215 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACTG1P63261 375 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 SP4Q02446 784 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 BNIP2Q12982 314 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZSCAN26Q16670 478 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC36A2Q495M3 483 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 PIGGQ5H8A4 983 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR2G6Q5TZ20 316 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 TMEM61Q8N0U2 210 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR2Y1Q8NGV0 311 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR51A7Q8NH64 312 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 ENKURQ8TC29 256 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 RNASEH2CQ8TDP1 164 aaKnown RBP3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 RORBQ92753 470 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 EEF1AKMT3Q96AZ1 226 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 S100PBPQ96BU1 408 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 FOXC2Q99958 501 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 KCTD14Q9BQ13 255 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 CHRNA10Q9GZZ6 450 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 VCXQ9H320 206 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 GIN1Q9NXP7 522 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 LRRC42Q9Y546 428 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC25A15Q9Y619 301 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 LTBP1Q14766 1721 aa3.09□□□□□ -1.91
HMGB1P38-201ENST00000490557 HIDE1A8MVS5 230 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 TMEM114B3SHH9 223 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 LAD1O00515 517 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 MRPS12O15235 138 aaKnown RBP3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 GATCO43716 136 aaKnown RBP3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 FKBP6O75344 327 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 TACSTD2P09758 323 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 ADRB3P13945 408 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 GFAPP14136 432 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZNF250P15622 560 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 MAS1LP35410 378 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 MAGEA3P43357 314 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 HSPA13P48723 471 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 LHX2P50458 406 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 RAB7AP51149 207 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 POLR2GP62487 172 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 RPL31P62899 125 aaKnown RBP3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 PAFAH1B2P68402 229 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZNF763Q0D2J5 394 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 TFDP2Q14188 446 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 GPNMBQ14956 572 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 PSG5Q15238 335 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 IMPG1Q17R60 797 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 BSXQ3C1V8 233 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 ACTL10Q5JWF8 245 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 IGFL3Q6UXB1 125 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 CD300LGQ6UXG3 332 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZNF620Q6ZNG0 422 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 PRSS41Q7RTY9 318 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 C6orf120Q7Z4R8 191 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 LINC01551Q86U37 167 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 LHFPL3Q86UP9 236 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 CYP4Z2PQ8N1L4 340 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 TMEM251Q8N6I4 163 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 WDR31Q8NA23 367 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 LFNGQ8NES3 379 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR5D18Q8NGL1 313 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 FCRL1Q96LA6 429 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 PPP1R36Q96LQ0 422 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 CALN1Q9BXU9 219 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 TOLLIPQ9H0E2 274 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 PORCNQ9H237 461 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 ISYNA1Q9NPH2 558 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 ASCL3Q9NQ33 180 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 NLE1Q9NVX2 485 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 TAS2R9Q9NYW1 312 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 CYB5R1Q9UHQ9 305 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 GNPTGQ9UJJ9 305 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 MMP17Q9ULZ9 603 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 CFL2Q9Y281 166 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 ABCB11O95342 1321 aa3.08□□□□□ -1.92
HMGB1P38-201ENST00000490557 IGKV2D-24A0A075B6R9 120 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 A0A0G2JN53 185 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RBMY1BA6NDE4 496 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RBMY1EA6NEQ0 496 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 M0R036 132 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 ATP8B1O43520 1251 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 DENRO43583 198 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 MGRN1O60291 552 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 SNAP29O95721 258 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 MOSP00540 346 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 GCGP01275 180 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 IFNA5P01569 189 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 APOEP02649 317 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 ORM1P02763 201 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RPS17P08708 135 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 CD3GP09693 182 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RBMY1DP0C7P1 496 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms