RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 RNF7Q9UBF6 113 aa16.54■□□□□ 0.24
SMC4-222ENST00000490207 LAMP5Q9UJQ1 280 aa16.54■□□□□ 0.24
SMC4-222ENST00000490207 AP4S1Q9Y587 144 aa16.54■□□□□ 0.24
SMC4-222ENST00000490207 CCDC182A6NF36 153 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 MITFO75030 526 aaPredicted RBP16.53■□□□□ 0.24
SMC4-222ENST00000490207 CIB2O75838 187 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 PSMA6P60900 246 aaKnown RBP16.53■□□□□ 0.24
SMC4-222ENST00000490207 GNB2P62879 340 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 LRRN1Q6UXK5 716 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 NLRC3Q7RTR2 1065 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 PLPP7Q8NBV4 271 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 OR8S1Q8NH09 359 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 ZNF418Q8TF45 676 aaPredicted RBP16.53■□□□□ 0.24
SMC4-222ENST00000490207 DUS3LQ96G46 650 aaKnown RBP16.53■□□□□ 0.24
SMC4-222ENST00000490207 RGCCQ9H4X1 137 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 INSIG2Q9Y5U4 225 aa16.53■□□□□ 0.24
SMC4-222ENST00000490207 A0A0A6YYJ9 748 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 A6NLC8 198 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 PRKYO43930 277 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 RGS9O75916 674 aaPredicted RBP16.52■□□□□ 0.24
SMC4-222ENST00000490207 FSHBP01225 129 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 MRPL3P09001 348 aaKnown RBP16.52■□□□□ 0.24
SMC4-222ENST00000490207 ZNF154Q13106 437 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 DCDC5Q6ZRR9 648 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 KRT77Q7Z794 578 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 AMIGO2Q86SJ2 522 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 ZDHHC13Q8IUH4 622 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 C19orf18Q8NEA5 215 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 SEMA6DQ8NFY4 1073 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 LRTOMTQ8WZ04 291 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 MRI1Q9BV20 369 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 YIPF3Q9GZM5 350 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 C14orf119Q9NWQ9 140 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 C1orf123Q9NWV4 160 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 ZNF319Q9P2F9 582 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 LRP12Q9Y561 859 aa16.52■□□□□ 0.24
SMC4-222ENST00000490207 DOCK11Q5JSL3 2073 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 M0R129 80 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 VENTXO95231 258 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 GRPP07492 148 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 ALOX5APP20292 161 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 CD80P33681 288 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 PITPNBP48739 271 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 GSK3AP49840 483 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 HOXA4Q00056 320 aaPredicted RBP16.51■□□□□ 0.23
SMC4-222ENST00000490207 ARMCX4Q5H9R4 360 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 KDM4DQ6B0I6 523 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 BOLLQ8N9W6 283 aaKnown RBP16.51■□□□□ 0.23
SMC4-222ENST00000490207 CSNK2A3Q8NEV1 391 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 TEAD3Q99594 435 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 NIPAL2Q9H841 368 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 ENOPH1Q9UHY7 261 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 AUP1Q9Y679 476 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 ANK2Q01484 3957 aa16.51■□□□□ 0.23
SMC4-222ENST00000490207 hCG_1807616A0A1W2PRN6 198 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 GNALP38405 381 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 HCCSP53701 268 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 OR8B8Q15620 311 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 KCNJ8Q15842 424 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 SNCBQ16143 134 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 SLX4IPQ5VYV7 408 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 LYPD2Q6UXB3 125 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 FTMTQ8N4E7 242 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 BPIFB2Q8N4F0 458 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 OR8B12Q8NGG6 310 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 CNN2Q99439 309 aaKnown RBP16.5■□□□□ 0.23
SMC4-222ENST00000490207 SLC6A7Q99884 636 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 PAPOLGQ9BWT3 736 aaKnown RBP16.5■□□□□ 0.23
SMC4-222ENST00000490207 STAB1Q9NY15 2570 aa16.5■□□□□ 0.23
SMC4-222ENST00000490207 ZAR1LA6NP61 321 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 C3orf80F5H4A9 247 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 LGALS8O00214 317 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 EPHA2P29317 976 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 C12orf73Q69YU5 71 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 SFRP4Q6FHJ7 346 aaPredicted RBP16.49■□□□□ 0.23
SMC4-222ENST00000490207 KCTD18Q6PI47 426 aaPredicted RBP16.49■□□□□ 0.23
SMC4-222ENST00000490207 BTNL3Q6UXE8 466 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 ZNF826PQ6ZT77 177 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 USP43Q70EL4 1123 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 WDR86Q86TI4 376 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 TCEANCQ8N8B7 351 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 SUCNR1Q9BXA5 334 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 TTTY10Q9BZA0 68 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 SEMA6AQ9H2E6 1030 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 TRIM36Q9NQ86 728 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 CLN8Q9UBY8 286 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 RHBDD3Q9Y3P4 386 aa16.49■□□□□ 0.23
SMC4-222ENST00000490207 IGHV2-70DA0A0C4DH43 119 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 OOEPA6NGQ2 149 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 PSMD9O00233 223 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 PHYHO14832 338 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 HILS1P60008 231 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 PAX2Q02962 417 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 NXNL2Q5VZ03 156 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 BCDIN3DQ7Z5W3 292 aaKnown RBP16.48■□□□□ 0.23
SMC4-222ENST00000490207 GCSAMQ8N6F7 178 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 TMEM163Q8TC26 289 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 CIB1Q99828 191 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 ZNF391Q9UJN7 358 aa16.48■□□□□ 0.23
SMC4-222ENST00000490207 COPS3Q9UNS2 423 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms