RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 OR51L1Q8NGJ5 315 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 LRTOMTQ8WZ04 291 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 PYURFQ96I23 114 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 CCL13Q99616 98 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 C16orf95Q9H693 158 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 EGLN3Q9H6Z9 239 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 SPAG4Q9NPE6 437 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 ONECUT1Q9UBC0 465 aa13.06□□□□□ -0.32
PLOD3-216ENST00000489927 GMNNO75496 209 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 IFNGR2P38484 337 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 PRB3Q04118 309 aaPredicted RBP13.05□□□□□ -0.32
PLOD3-216ENST00000489927 TSPAN31Q12999 210 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 MICBQ29980 383 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 WDR38Q5JTN6 314 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 DHRS7BQ6IAN0 325 aaPredicted RBP13.05□□□□□ -0.32
PLOD3-216ENST00000489927 ZDHHC21Q8IVQ6 265 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 LY6G5BQ8NDX9 201 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 OR4C15Q8NGM1 316 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 OR2T4Q8NH00 348 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 OR8S1Q8NH09 359 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 FAM110DQ8TAY7 271 aaPredicted RBP13.05□□□□□ -0.32
PLOD3-216ENST00000489927 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 KCNJ15Q99712 375 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 CCDC134Q9H6E4 229 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 OPA3Q9H6K4 179 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 GORASP2Q9H8Y8 452 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 SIRT7Q9NRC8 400 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 ZNRD1Q9P1U0 126 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 VPREB3Q9UKI3 123 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 COMMD3-BMI1R4GMX3 469 aa13.05□□□□□ -0.32
PLOD3-216ENST00000489927 ANKRD30BLA7E2S9 258 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.04□□□□□ -0.32
PLOD3-216ENST00000489927 FBP1P09467 338 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 SPARCP09486 303 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 MUC1P15941 1255 aaPredicted RBP13.04□□□□□ -0.32
PLOD3-216ENST00000489927 RRM2P31350 389 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 GRK5P34947 590 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 DLX1P56177 255 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 CSNK2BP67870 215 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 TAF13Q15543 124 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 PGBD2Q6P3X8 592 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 METAP1DQ6UB28 335 aaPredicted RBP13.04□□□□□ -0.32
PLOD3-216ENST00000489927 WDR82Q6UXN9 313 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 FAM216BQ8N7L0 139 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 GNPDA2Q8TDQ7 276 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 SPSB4Q96A44 273 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 SLAMF6Q96DU3 332 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 SEH1LQ96EE3 360 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 RNPEPL1Q9HAU8 725 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 CENPMQ9NSP4 180 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 DNAJB11Q9UBS4 358 aa13.04□□□□□ -0.32
PLOD3-216ENST00000489927 ZNF816-ZNF321PA0A0X1KG74 233 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 ACOT8O14734 319 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 XRCC2O43543 280 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 TSPAN9O75954 239 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 DDOSTP39656 456 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 FAM3AP98173 230 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 SLC16A9Q7RTY1 509 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 SLC36A1Q7Z2H8 476 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 DPY19L4Q7Z388 723 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 SLC37A3Q8NCC5 494 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 OR1M1Q8NGA1 313 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 OR52L1Q8NGH7 329 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 OR9Q1Q8NGQ5 310 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 NPRL2Q8WTW4 380 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 MCUR1Q96AQ8 359 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 CMTM5Q96DZ9 223 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 CAB39Q9Y376 341 aaPredicted RBP13.03□□□□□ -0.32
PLOD3-216ENST00000489927 CDH10Q9Y6N8 788 aa13.03□□□□□ -0.32
PLOD3-216ENST00000489927 A0A1W2PRD5 423 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 A0A1W2PRF3 423 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 A0A1W2PRM7 423 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 BTBD17A6NE02 478 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 RNASEK-C17orf49H0YIS7 233 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 ZNF593O00488 134 aaPredicted RBP13.02□□□□□ -0.33
PLOD3-216ENST00000489927 TBX1O43435 398 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 FABP3P05413 133 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 GYPBP06028 91 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 AMY2BP19961 511 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 ENTPD1P49961 510 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 EGR3Q06889 387 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 IKZF1Q13422 519 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 C2orf68Q2NKX9 166 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 CMTM4Q8IZR5 234 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 Q8N7P7 452 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 ZNF511Q8NB15 262 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 OR8D4Q8NGM9 314 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 SGK3Q96BR1 496 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 DMRTB1Q96MA1 342 aa13.02□□□□□ -0.33
PLOD3-216ENST00000489927 PRPF19Q9UMS4 504 aaKnown RBP13.02□□□□□ -0.33
PLOD3-216ENST00000489927 ZNF878C9JN71 531 aa13.01□□□□□ -0.33
PLOD3-216ENST00000489927 CDIPTO14735 213 aa13.01□□□□□ -0.33
PLOD3-216ENST00000489927 NPFFO15130 113 aa13.01□□□□□ -0.33
PLOD3-216ENST00000489927 GPR37O15354 613 aa13.01□□□□□ -0.33
PLOD3-216ENST00000489927 NDUFB3O43676 98 aa13.01□□□□□ -0.33
PLOD3-216ENST00000489927 ANXA2P07355 339 aaKnown RBP13.01□□□□□ -0.33
PLOD3-216ENST00000489927 EEF1B2P24534 225 aaKnown RBP13.01□□□□□ -0.33
PLOD3-216ENST00000489927 FMO3P31513 532 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms