RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TBCCD1Q9NVR7 557 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 JKAMPQ9P055 326 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 ABRACLQ9P1F3 81 aa8.67□□□□□ -1.02
USP11-211ENST00000489111 MAP1BP46821 2468 aaKnown RBP8.66□□□□□ -1.02
USP11-211ENST00000489111 ZNF816-ZNF321PA0A0X1KG74 233 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 A0A1B0GUH1 482 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 FAM90A27PA6NNH2 459 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 FAM25AB3EWG3 89 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 FAM25CB3EWG5 89 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 FAM25GB3EWG6 89 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 M0R1B8 84 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 SLC17A2O00624 439 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 HPGDSO60760 199 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 SMPD2O60906 423 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 NGFP01138 241 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 IGLV1-44P01699 117 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 SNRPBP14678 240 aaKnown RBP8.66□□□□□ -1.02
USP11-211ENST00000489111 CCKARP32238 428 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 TNFSF8P32971 234 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 THBS2P35442 1172 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 TALDO1P37837 337 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 RANBP1P43487 201 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 CAPZA1P52907 286 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 PPP1CBP62140 327 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 FAM3AP98173 230 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 FAM27E3Q08E93 113 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 GK2Q14410 553 aaPredicted RBP8.66□□□□□ -1.02
USP11-211ENST00000489111 P2RY14Q15391 338 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 CNN3Q15417 329 aaKnown RBP8.66□□□□□ -1.02
USP11-211ENST00000489111 OR8B8Q15620 311 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 TAB1Q15750 504 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 C3orf36Q3SXR2 165 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 CLVS2Q5SYC1 327 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 ZBTB37Q5TC79 503 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 ASPHD2Q6ICH7 369 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 MTFR2Q6P444 385 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 Q6ZSR3 168 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 UTS2BQ765I0 119 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 SSX8Q7RTT4 187 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 ZNF101Q8IZC7 436 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 MFSD4AQ8N468 514 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 OR6M1Q8NGM8 313 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 LGALS14Q8TCE9 139 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 ITFG2Q969R8 447 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 WDFY2Q96P53 400 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 SORCS2Q96PQ0 1159 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 KCNN3Q9UGI6 736 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 STEAP1Q9UHE8 339 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 STARD10Q9Y365 291 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 ETV7Q9Y603 341 aa8.66□□□□□ -1.02
USP11-211ENST00000489111 A0A0B4J203 849 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 IGHV2OR16-5A0A0B4J2B6 119 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 IGHV1-18A0A0C4DH31 117 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 ICMTO60725 284 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 PAHP00439 452 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 INHBBP09529 407 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 FAM157BP0CG42 384 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 CALCBP10092 127 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 PPP3CBP16298 524 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 PRKACBP22694 351 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 ACKR3P25106 362 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 CFPP27918 469 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 HTR2CP28335 458 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 RAD52P43351 418 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 PRSS12P56730 875 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 CLDN12P56749 244 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 SCAND1P57086 179 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 ZNF45Q02386 682 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 DCTN2Q13561 401 aaKnown RBP8.65□□□□□ -1.02
USP11-211ENST00000489111 HLXQ14774 488 aaPredicted RBP8.65□□□□□ -1.02
USP11-211ENST00000489111 UBE2NLQ5JXB2 153 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 SPATA46Q5T0L3 261 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 ZNF529Q6P280 563 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 CCDC190Q86UF4 302 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 LRRC28Q86X40 367 aaPredicted RBP8.65□□□□□ -1.02
USP11-211ENST00000489111 PNLDC1Q8NA58 520 aaKnown RBP8.65□□□□□ -1.02
USP11-211ENST00000489111 GALNT11Q8NCW6 608 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 CSNK2A3Q8NEV1 391 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 OR56B2PQ8NGI1 322 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 OR52N4Q8NGI2 321 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 NPRL2Q8WTW4 380 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 ZFAND2BQ8WV99 257 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 BORCS5Q969J3 196 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 SPSB1Q96BD6 273 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 DIRAS2Q96HU8 199 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 TECTBQ96PL2 329 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 GPER1Q99527 375 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 UQCC2Q9BRT2 126 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
USP11-211ENST00000489111 PAPOLGQ9BWT3 736 aaKnown RBP8.65□□□□□ -1.02
USP11-211ENST00000489111 OR10A4Q9H209 315 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 MIXL1Q9H2W2 232 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 METTL17Q9H7H0 456 aaPredicted RBP8.65□□□□□ -1.02
USP11-211ENST00000489111 GPR173Q9NS66 373 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 CGGBP1Q9UFW8 167 aaPredicted RBP8.65□□□□□ -1.02
USP11-211ENST00000489111 SLC7A11Q9UPY5 501 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 SPEF1Q9Y4P9 236 aa8.65□□□□□ -1.02
USP11-211ENST00000489111 LOC100289279A0A1B0GTE1 492 aa8.64□□□□□ -1.03
USP11-211ENST00000489111 ANKRD30BLA7E2S9 258 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms