RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TMEM105Q8N8V8 129 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 SPANXA2-OT1Q8N9U9 137 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 GATSQ8NAP1 163 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 C19orf18Q8NEA5 215 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 OR4M1Q8NGD0 313 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 RXFP4Q8TDU9 374 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 RTN4IP1Q8WWV3 396 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 JSRP1Q96MG2 331 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 ZFP3Q96NJ6 502 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 OPALINQ96PE5 141 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 RNF157Q96PX1 679 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 OR4K3Q96R72 315 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 SULT4A1Q9BR01 284 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 ZNF717Q9BY31 904 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 EXOSC4Q9NPD3 245 aaKnown RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 FBXO8Q9NRD0 319 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 DDX18Q9NVP1 670 aaKnown RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 MRPL22Q9NWU5 206 aaKnown RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 FARSAQ9Y285 508 aaKnown RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 ZNF257Q9Y2Q1 563 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 CAB39Q9Y376 341 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 CBY1Q9Y3M2 126 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 CENPVL3A0A0U1RRI6 287 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 A0A1W2PRD5 423 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 ZNF233A6NK53 670 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 BTNL10A8MVZ5 291 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 POLR1CO15160 346 aaPredicted RBP1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 RAD1O60671 282 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 EIF1BO60739 113 aaKnown RBP1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 IGLV3-19P01714 112 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 CATP04040 527 aaKnown RBP1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 TACSTD2P09758 323 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 TGFBR1P36897 503 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 EIF1P41567 113 aaKnown RBP1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 GPR1P46091 355 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 UBE2E1P51965 193 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 CLDN8P56748 225 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 ELF3P78545 371 aaPredicted RBP1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 DMC1Q14565 340 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 TSC22D1Q15714 1073 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 SLC25A35Q3KQZ1 300 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 BEX5Q5H9J7 111 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 PRR9Q5T870 116 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 PIP5KL1Q5T9C9 394 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 OR2T5Q6IEZ7 315 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 OPN5Q6U736 354 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 RAB43Q86YS6 212 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 MICU2Q8IYU8 434 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 KIF2BQ8N4N8 673 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 DRAM1Q8N682 238 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 ST20-AS1Q8NBB2 130 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 BBOF1Q8ND07 529 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 OR2T29Q8NH02 315 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 GPX8Q8TED1 209 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 GLYATL2Q8WU03 294 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 PEX13Q92968 403 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 WDR34Q96EX3 536 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 FAM19A4Q96LR4 140 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 UBE2E2Q96LR5 201 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 SCGB3A2Q96PL1 93 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 AGMATQ9BSE5 352 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 NUDT9Q9BW91 350 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 CALN1Q9BXU9 219 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 ZSCAN16Q9H4T2 348 aaPredicted RBP1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 ZMAT5Q9UDW3 170 aaKnown RBP1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 ENOPH1Q9UHY7 261 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 SAR1BQ9Y6B6 198 aa1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 BRCA1P38398 1863 aaKnown RBP1.47□□□□□ -2.17
R3HDM1-219ENST00000488035 SVILO95425 2214 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 A0A0A6YYD5 115 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 ARPC4-TTLL3A0A0A6YYG9 625 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 CCL15-CCL14A0A0B4J2E2 113 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 A0A1B0GTQ1 180 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 A0A1B0GUH1 482 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 GOLGA6L7A0A1B0GV03 622 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 TMEM120BA0PK00 339 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 M0R1X1 148 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 CTNSO60931 367 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 MPDU1O75352 247 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 CYB5R3P00387 301 aaPredicted RBP1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 PAHP00439 452 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 TRBV12-3P01733 135 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 MT-ND4P03905 459 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 STAG3L3P0CL85 134 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 CD28P10747 220 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 THRAP10827 490 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 IL1RNP18510 177 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 RAB5AP20339 215 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 HTR1DP28221 377 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 OR1G1P47890 313 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 OR1Q1Q15612 314 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 CCL15Q16663 113 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 C6orf99Q4VX62 202 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 KPRPQ5T749 579 aaPredicted RBP1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 TMEM236Q5W0B7 351 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 PLCXD3Q63HM9 321 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 LINC00336Q6ZUF6 198 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 TMCO2Q7Z6W1 182 aaPredicted RBP1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 UNC93AQ86WB7 457 aa1.46□□□□□ -2.18
R3HDM1-219ENST00000488035 CMTM8Q8IZV2 173 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms