RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ARMC10Q8N2F6 343 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 TMEM156Q8N614 296 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 NUDCD2Q8WVJ2 157 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 DMRTA2Q96SC8 542 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 LPAR5Q9H1C0 372 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 GLS2Q9UI32 602 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 B4E171 279 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 RLN2P04090 185 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 ZNF17P17021 662 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 TSPAN7P41732 249 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 CSNK2A1P68400 391 aaPredicted RBP23.03■■□□□ 1.28
HLA-C-208ENST00000487245 JMJD6Q6NYC1 403 aaPredicted RBP23.03■■□□□ 1.28
HLA-C-208ENST00000487245 GVQW1Q8N7I0 195 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 C1orf147Q96MC9 270 aaPredicted RBP23.03■■□□□ 1.28
HLA-C-208ENST00000487245 PHB2Q99623 299 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 PROK2Q9HC23 129 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 PNRC2Q9NPJ4 139 aaKnown RBP23.03■■□□□ 1.28
HLA-C-208ENST00000487245 HPF1Q9NWY4 346 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 RASL12Q9NYN1 266 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 DKKL1Q9UK85 242 aa23.03■■□□□ 1.28
HLA-C-208ENST00000487245 POM121CA8CG34 1229 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 BCL2L11O43521 198 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 CSN2P05814 226 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 GP1BAP07359 652 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 CTSSP25774 331 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 CSNK1A1P48729 337 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 PRKXP51817 358 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 ZNF133P52736 654 aaPredicted RBP23.02■■□□□ 1.28
HLA-C-208ENST00000487245 ZNF121P58317 390 aaPredicted RBP23.02■■□□□ 1.28
HLA-C-208ENST00000487245 C1orf210Q8IVY1 113 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 TMEM54Q969K7 222 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 C1QTNF6Q9BXI9 259 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 DNTTIP1Q9H147 329 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 KCNK7Q9Y2U2 307 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 SPDEFO95238 335 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 GNB3P16520 340 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 HRH1P35367 487 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 TAS2R31P59538 309 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 TUSC1Q2TAM9 212 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 ACTBL2Q562R1 376 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 C10orf128Q5T292 105 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 DOK3Q7L591 496 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 OR8B12Q8NGG6 310 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 KCNG3Q8TAE7 436 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 INTS12Q96CB8 462 aaKnown RBP23.02■■□□□ 1.28
HLA-C-208ENST00000487245 PHYHIPLQ96FC7 376 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 TMEM41AQ96HV5 264 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 SELENOIQ9C0D9 397 aa23.02■■□□□ 1.28
HLA-C-208ENST00000487245 MRPS28Q9Y2Q9 187 aaKnown RBP23.02■■□□□ 1.28
HLA-C-208ENST00000487245 KANTRA0A1W2PQU2 76 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 EFSO43281 561 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 ZIC3O60481 467 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 CBR3O75828 277 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 PNLIPRP3Q17RR3 467 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 RAET1LQ5VY80 246 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 OR52W1Q6IF63 320 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 ACOT7LQ6ZUV0 252 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 HOGA1Q86XE5 327 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 PDCD10Q9BUL8 212 aa23.01■■□□□ 1.27
HLA-C-208ENST00000487245 GJE1A6NN92 205 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 OR2AT4A6NND4 320 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 RER1O15258 196 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 DUS4LO95620 317 aaKnown RBP23■■□□□ 1.27
HLA-C-208ENST00000487245 MSR1P21757 451 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 CX3CR1P49238 355 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 VAX1Q5SQQ9 334 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 FOXL2NBQ6ZUU3 175 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 ABHD12BQ7Z5M8 362 aaPredicted RBP23■■□□□ 1.27
HLA-C-208ENST00000487245 NAA40Q86UY6 237 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 ZNF283Q8N7M2 679 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 PXT1Q8NFP0 134 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 SSC4DQ8WTU2 575 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 SGCZQ96LD1 299 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 GNRHR2Q96P88 292 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 ZNF160Q9HCG1 818 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 CEACAM18A8MTB9 384 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 IFNA6P05013 189 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 ICAM2P13598 275 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 RAC1P63000 192 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 IL13RA1P78552 427 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 SGCAQ16586 387 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 GLIPR1L1Q6UWM5 242 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 MOB3CQ70IA8 216 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 COMMD2Q86X83 199 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 ST8SIA4Q92187 359 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 PIGQQ9BRB3 760 aa23■■□□□ 1.27
HLA-C-208ENST00000487245 A0A0A6YYD4 124 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 RNF222A6NCQ9 220 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 DBX1A6NMT0 343 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 NPIPA2E9PIF3 369 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 NPIPA3F8WFD2 350 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 KLK2P20151 261 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 SLC22A6Q4U2R8 563 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 SMUG1Q53HV7 270 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 ZNF101Q8IZC7 436 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 DEFB123Q8N688 67 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 PPP1R1CQ8WVI7 109 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 FBXW5Q969U6 566 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 NELFAQ9H3P2 528 aa22.99■■□□□ 1.27
HLA-C-208ENST00000487245 GPR84Q9NQS5 396 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms