RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 OCLNQ16625 522 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF181Q2M3W8 571 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 FTMTQ8N4E7 242 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 SPERTQ8NA61 448 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 CSNK2A3Q8NEV1 391 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 OR2T27Q8NH04 317 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 ZNF420Q8TAQ5 688 aaPredicted RBP15.34■□□□□ 0.05
COL1A1-207ENST00000486572 DVL3Q92997 716 aaPredicted RBP15.34■□□□□ 0.05
COL1A1-207ENST00000486572 ERGIC1Q969X5 290 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 RDH12Q96NR8 316 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 TBX5Q99593 518 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 APOL4Q9BPW4 351 aa15.34■□□□□ 0.05
COL1A1-207ENST00000486572 SMPD3Q9NY59 655 aaPredicted RBP15.34■□□□□ 0.05
COL1A1-207ENST00000486572 A0A0U1RQV5 110 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 A0A1W2PQL4 384 aaPredicted RBP15.33■□□□□ 0.04
COL1A1-207ENST00000486572 LRRC30A6NM36 301 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 SNTNA6NMZ2 147 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 FAM157AC9JC47 383 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 MPZL2O60487 215 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 IGHV2-5P01817 119 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 MTNR1AP48039 350 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 MFGE8Q08431 387 aaPredicted RBP15.33■□□□□ 0.04
COL1A1-207ENST00000486572 MZT1Q08AG7 82 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 PRAMEF6Q5VXH4 476 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 SSX6Q7RTT6 188 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 OR10H4Q8NGA5 316 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 LYZL4Q96KX0 146 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 PBOV1Q9GZY1 135 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 MOB1AQ9H8S9 216 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 C8orf4Q9NR00 106 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 FAM118AQ9NWS6 357 aa15.33■□□□□ 0.04
COL1A1-207ENST00000486572 NUFIP1Q9UHK0 495 aaKnown RBP15.33■□□□□ 0.04
COL1A1-207ENST00000486572 MRM2Q9UI43 246 aaKnown RBP15.33■□□□□ 0.04
COL1A1-207ENST00000486572 LOC100130705A0A1B0GUX0 176 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 MAGEB4O15481 346 aaPredicted RBP15.32■□□□□ 0.04
COL1A1-207ENST00000486572 SRSF10O75494 262 aaKnown RBP15.32■□□□□ 0.04
COL1A1-207ENST00000486572 PTBP3O95758 552 aaKnown RBP15.32■□□□□ 0.04
COL1A1-207ENST00000486572 CYB5R3P00387 301 aaPredicted RBP15.32■□□□□ 0.04
COL1A1-207ENST00000486572 KRT8P05787 483 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 GABRB1P18505 474 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 GNALP38405 381 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 ZMYND11Q15326 602 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 LRRC36Q1X8D7 754 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 TMEM155Q4W5P6 130 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 ENTHD1Q8IYW4 607 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 C1orf87Q8N0U7 546 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 SPICQ8N5J4 248 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 PLPP7Q8NBV4 271 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 OR11L1Q8NGX0 322 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 OR8S1Q8NH09 359 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 Q8TCH9 128 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 PAPOLGQ9BWT3 736 aaKnown RBP15.32■□□□□ 0.04
COL1A1-207ENST00000486572 FN3KRPQ9HA64 309 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 UFSP2Q9NUQ7 469 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 C14orf119Q9NWQ9 140 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 UBAP1Q9NZ09 502 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 CDC42EP3Q9UKI2 254 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 GTF2A1LQ9UNN4 478 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 R4GMQ9 66 aa15.32■□□□□ 0.04
COL1A1-207ENST00000486572 MALRD1Q5VYJ5 2156 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 LOC110117498-PIK3R3F6TDL0 507 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 SLC16A6O15403 523 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 PNPP00491 289 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 MSMBP08118 114 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 IRF2P14316 349 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 ACKR3P25106 362 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 PEX2P28328 305 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 MDH2P40926 338 aaKnown RBP15.31■□□□□ 0.04
COL1A1-207ENST00000486572 PMELP40967 661 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 DVL1P1P54792 670 aaPredicted RBP15.31■□□□□ 0.04
COL1A1-207ENST00000486572 ACTC1P68032 377 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 ACTA1P68133 377 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 MPPED2Q15777 294 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 BCL2L15Q5TBC7 163 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 LPCAT4Q643R3 524 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 PLEKHG7Q6ZR37 379 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 ZNF771Q7L3S4 317 aaPredicted RBP15.31■□□□□ 0.04
COL1A1-207ENST00000486572 GLCCI1Q86VQ1 547 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 LRRC28Q86X40 367 aaPredicted RBP15.31■□□□□ 0.04
COL1A1-207ENST00000486572 COMMD2Q86X83 199 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 MUC20Q8N307 709 aaPredicted RBP15.31■□□□□ 0.04
COL1A1-207ENST00000486572 GALNT4Q8N4A0 578 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 KLHL36Q8N4N3 616 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 PACRGLQ8N7B6 248 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 YIPF7Q8N8F6 280 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 ZNF555Q8NEP9 628 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 OR51F2Q8NH61 342 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 RNFT2Q96EX2 444 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 LPAR2Q9HBW0 351 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 LPAR3Q9UBY5 353 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 AASSQ9UDR5 926 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 RHBDD3Q9Y3P4 386 aa15.31■□□□□ 0.04
COL1A1-207ENST00000486572 DLGAP1O14490 977 aa15.3■□□□□ 0.04
COL1A1-207ENST00000486572 FAM20BO75063 409 aa15.3■□□□□ 0.04
COL1A1-207ENST00000486572 SULT1C4O75897 302 aa15.3■□□□□ 0.04
COL1A1-207ENST00000486572 TTRP02766 147 aa15.3■□□□□ 0.04
COL1A1-207ENST00000486572 CHRFAM7AQ494W8 412 aa15.3■□□□□ 0.04
COL1A1-207ENST00000486572 ZNF684Q5T5D7 378 aa15.3■□□□□ 0.04
COL1A1-207ENST00000486572 RHOXF1Q8NHV9 184 aa15.3■□□□□ 0.04
COL1A1-207ENST00000486572 OR51E1Q8TCB6 317 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms