RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 DUX4L5P0CJ88 424 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 DUX4L6P0CJ89 424 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 DUX4L7P0CJ90 424 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 CLUP10909 449 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 KRTAP10-3P60369 221 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 PDCD1Q15116 288 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 MIDNQ504T8 468 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 TEX36Q5VZQ5 186 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 DUX4L9Q6RFH8 374 aaPredicted RBP15.89■□□□□ 0.13
COL27A1-205ENST00000485397 WDR86Q86TI4 376 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 OR4Q3Q8NH05 313 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 SSMEM1Q8WWF3 244 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 ST8SIA4Q92187 359 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 SPSB4Q96A44 273 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 TRIM15Q9C019 465 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 TBC1D23Q9NUY8 699 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 ARL8BQ9NVJ2 186 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 C14orf119Q9NWQ9 140 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 DUX4Q9UBX2 424 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 POMT1Q9Y6A1 747 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 A0A0U1RQK1 487 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 ANKRD30BLA7E2S9 258 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 XRCC2O43543 280 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 CCNB2O95067 398 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 IGHV4-59P01825 116 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 SPI1P17947 270 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 FAM3AP98173 230 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 MZT1Q08AG7 82 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 TEX30Q5JUR7 227 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 CYP2R1Q6VVX0 501 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 SLC16A9Q7RTY1 509 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 OR8S1Q8NH09 359 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 TBC1D15Q8TC07 691 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 LRRC29Q8WV35 223 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 SGK3Q96BR1 496 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 CCL13Q99616 98 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 CITED1Q99966 193 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 NMNAT2Q9BZQ4 307 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 OPA3Q9H6K4 179 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 PPP1R3EQ9H7J1 279 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 KAAG1Q9UBP8 84 aa15.88■□□□□ 0.13
COL27A1-205ENST00000485397 DHRS12A0PJE2 317 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 ZNF878C9JN71 531 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 ECDO95905 644 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-205ENST00000485397 ANXA2P07355 339 aaKnown RBP15.87■□□□□ 0.13
COL27A1-205ENST00000485397 ATP6V1B2P21281 511 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 DDOSTP39656 456 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 CX3CR1P49238 355 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 SLC25A1P53007 311 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 CSNK2BP67870 215 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 BRICD5Q6PL45 260 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 DEFB107AQ8IZN7 70 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 LINC00471Q8N535 108 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 AQP11Q8NBQ7 271 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 SCCPDHQ8NBX0 429 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 OR6K6Q8NGW6 343 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 SEH1LQ96EE3 360 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 CNTD2Q9H8S5 307 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 ARMC1Q9NVT9 282 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 TAGLN3Q9UI15 199 aa15.87■□□□□ 0.13
COL27A1-205ENST00000485397 RPUSD1Q9UJJ7 312 aaKnown RBP15.87■□□□□ 0.13
COL27A1-205ENST00000485397 GPR137BO60478 399 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 SOX14O95416 240 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 EIF2B1Q14232 305 aaKnown RBP15.86■□□□□ 0.13
COL27A1-205ENST00000485397 TIGD6Q17RP2 521 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 WDR38Q5JTN6 314 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 LINC01590Q5TEZ4 76 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 RHOUQ7L0Q8 258 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 DPY19L4Q7Z388 723 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 PIP4P2Q8N4L2 257 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 OR1M1Q8NGA1 313 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 DYRK2Q92630 601 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 REEP6Q96HR9 211 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 CCT8L2Q96SF2 557 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 RNPEPL1Q9HAU8 725 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 VNN3Q9NY84 501 aa15.86■□□□□ 0.13
COL27A1-205ENST00000485397 WNK1Q9H4A3 2382 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.85■□□□□ 0.13
COL27A1-205ENST00000485397 GRK5P34947 590 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 SLC15A1P46059 708 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 IER3P46695 156 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 GRB2P62993 217 aaKnown RBP15.85■□□□□ 0.13
COL27A1-205ENST00000485397 PRB3Q04118 309 aaPredicted RBP15.85■□□□□ 0.13
COL27A1-205ENST00000485397 MICBQ29980 383 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 CDONQ4KMG0 1287 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 KLHL12Q53G59 568 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 C16orf89Q6UX73 402 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 WDR82Q6UXN9 313 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 FAM57BQ71RH2 274 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 VMO1Q7Z5L0 202 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 CPLX4Q7Z7G2 160 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 LDLRAD3Q86YD5 345 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 FAM216BQ8N7L0 139 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 OR2T33Q8NG76 320 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 LINC01006Q8NI28 216 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 DNAJC27Q9NZQ0 273 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 ZNF319Q9P2F9 582 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 BAIAP2Q9UQB8 552 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 RNF114Q9Y508 228 aa15.85■□□□□ 0.13
COL27A1-205ENST00000485397 KPTNQ9Y664 436 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms