RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 NPRL2Q8WTW4 380 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 LRTOMTQ8WZ04 291 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 UBE2FQ969M7 185 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 UTP4Q969X6 686 aaKnown RBP10.76□□□□□ -0.69
HDAC6-227ENST00000485102 CENPNQ96H22 339 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-227ENST00000485102 FAM46AQ96IP4 442 aaKnown RBP10.76□□□□□ -0.69
HDAC6-227ENST00000485102 TSSK2Q96PF2 358 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 TECTBQ96PL2 329 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 ATF6BQ99941 703 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 PKP2Q99959 881 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 PNRC2Q9NPJ4 139 aaKnown RBP10.76□□□□□ -0.69
HDAC6-227ENST00000485102 TNFRSF19Q9NS68 423 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 LYVE1Q9Y5Y7 322 aa10.76□□□□□ -0.69
HDAC6-227ENST00000485102 C5orf63A6NC05 138 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 ERICH4A6NGS2 130 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 CD300LBA8K4G0 201 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 F5H5K5 113 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 ADAM20O43506 726 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 TSPAN9O75954 239 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 LHBP01229 141 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 LCATP04180 440 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 OTX1P32242 354 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-227ENST00000485102 GGT2P36268 569 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 MEP1BQ16820 701 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 MICAQ29983 383 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 PRAMEF6Q5VXH4 476 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 SMARCD3Q6STE5 483 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 CFAP77Q6ZQR2 320 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 C19orf18Q8NEA5 215 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 OR5K1Q8NHB7 308 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 GIPC3Q8TF64 312 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 SPRYD4Q8WW59 207 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-227ENST00000485102 SLCO4A1Q96BD0 722 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 FUZQ9BT04 418 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 DPAGT1Q9H3H5 408 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 SMURF1Q9HCE7 757 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 UFSP2Q9NUQ7 469 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 MRPL15Q9P015 296 aaKnown RBP10.75□□□□□ -0.69
HDAC6-227ENST00000485102 KCNG2Q9UJ96 466 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 KPTNQ9Y664 436 aa10.75□□□□□ -0.69
HDAC6-227ENST00000485102 OOEPA6NGQ2 149 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 FCN3O75636 299 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 IGHV4-59P01825 116 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 CA6P23280 308 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 TPTEP56180 551 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 TSPAN31Q12999 210 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 OR8G1Q15617 311 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 RFX4Q33E94 735 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 CDONQ4KMG0 1287 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 FBLN7Q53RD9 439 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 TEX36Q5VZQ5 186 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 SFRP4Q6FHJ7 346 aaPredicted RBP10.74□□□□□ -0.69
HDAC6-227ENST00000485102 Q6ZSV7 163 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 NAA40Q86UY6 237 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 OR52J3Q8NH60 311 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 PITX2Q99697 317 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 DGCR6LQ9BY27 220 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 CNTD2Q9H8S5 307 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 TCF7L1Q9HCS4 588 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 SRA1Q9HD15 236 aaKnown RBP10.74□□□□□ -0.69
HDAC6-227ENST00000485102 ORC6Q9Y5N6 252 aa10.74□□□□□ -0.69
HDAC6-227ENST00000485102 A0A0U1RQK1 487 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 A0A1B0GVI7 797 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 UNC119BA6NIH7 251 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 G3V2T6 193 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 M0R135 149 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 IDH3BO43837 385 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 RENP00797 406 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 PRSS12P56730 875 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 ARF6P62330 175 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 MZT1Q08AG7 82 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 CD300LDQ6UXZ3 194 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 BTN2A1Q7KYR7 527 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 MRPL21Q7Z2W9 205 aaKnown RBP10.73□□□□□ -0.69
HDAC6-227ENST00000485102 FAM90A1Q86YD7 464 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 LINC00346Q8IVM7 164 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 GCSAMQ8N6F7 178 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 OR52L1Q8NGH7 329 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 OR2AJ1Q8NGZ0 328 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 LHX4Q969G2 390 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 SPTSSAQ969W0 71 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 ZNF799Q96GE5 643 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 ERMAPQ96PL5 475 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-227ENST00000485102 NMNAT3Q96T66 252 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 PRRG3Q9BZD7 231 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 DCLRE1BQ9H816 532 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 S100A14Q9HCY8 104 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 RPUSD1Q9UJJ7 312 aaKnown RBP10.73□□□□□ -0.69
HDAC6-227ENST00000485102 BAIAP2Q9UQB8 552 aa10.73□□□□□ -0.69
HDAC6-227ENST00000485102 CAB39Q9Y376 341 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-227ENST00000485102 TRBV4-1A0A0J9YWV2 114 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 C3orf80F5H4A9 247 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 DVL1O14640 695 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 GPR37O15354 613 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 DIRAS1O95057 198 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 MUC1P15941 1255 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-227ENST00000485102 HIST1H1CP16403 213 aaKnown RBP10.72□□□□□ -0.69
HDAC6-227ENST00000485102 DDOSTP39656 456 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms