RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 SLC10A1Q14973 349 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 PHLDA2Q53GA4 152 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 SYT14P1Q58G82 188 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 BHLHB9Q6PI77 547 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 CD300LDQ6UXZ3 194 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 USP43Q70EL4 1123 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF554Q86TJ5 538 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 OR4F6Q8NGB9 312 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 IL17DQ8TAD2 202 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 IGFBPL1Q8WX77 278 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 FOXC2Q99958 501 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 PRRG4Q9BZD6 226 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 OR51M1Q9H341 326 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 DLL4Q9NR61 685 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 KCNG2Q9UJ96 466 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 CDH10Q9Y6N8 788 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 TEX13DA0A0J9YY54 714 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-205ENST00000485055 A1L4Q6 167 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 TVP23AA6NH52 213 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 FADS1O60427 444 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF354AO60765 605 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-205ENST00000485055 NDUFA7O95182 113 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 ADH4P08319 380 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 SAGP10523 405 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-205ENST00000485055 MYL2P10916 166 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 KITLGP21583 273 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 PTGER1P34995 402 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 CHN2P52757 468 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 CRYBA4P53673 196 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 PNRC1Q12796 327 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-205ENST00000485055 SKP2Q13309 424 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 CDSNQ15517 529 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 NPTX1Q15818 432 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM64Q6YI46 380 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 DGAT2L6Q6ZPD8 337 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 COMMD6Q7Z4G1 85 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 MRGPRGQ86SM5 289 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 DHFR2Q86XF0 187 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM170AQ8WVE7 144 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 XAGE5Q8WWM1 108 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 RND1Q92730 232 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 CDS1Q92903 461 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF385AQ96PM9 386 aaKnown RBP4.58□□□□□ -1.68
CCDC39-205ENST00000485055 ASB6Q9NWX5 421 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 CLCF1Q9UBD9 225 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 L3MBTL1Q9Y468 752 aa4.58□□□□□ -1.68
CCDC39-205ENST00000485055 TRAV18A0A075B6X5 111 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 M0R3G1 203 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 SLC31A2O15432 143 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 MAGEB4O15481 346 aaPredicted RBP4.57□□□□□ -1.68
CCDC39-205ENST00000485055 PRKRAO75569 313 aaKnown RBP4.57□□□□□ -1.68
CCDC39-205ENST00000485055 PDYNP01213 254 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ADORA3P0DMS8 318 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 RPL3P39023 403 aaKnown RBP4.57□□□□□ -1.68
CCDC39-205ENST00000485055 CRISP1P54107 249 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 CLDN12P56749 244 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 B3GALT5-AS1P59052 145 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 C2orf80Q0P641 193 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 LTB4RQ15722 352 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 TRIM16LQ309B1 348 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 RFX4Q33E94 735 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 GCSAMLQ5JQS6 135 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 TEX30Q5JUR7 227 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 IDNKQ5T6J7 187 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 CROCCP2Q86T23 111 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 CPSF7Q8N684 471 aaKnown RBP4.57□□□□□ -1.68
CCDC39-205ENST00000485055 OR10A7Q8NGE5 316 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 LYPD6BQ8NI32 183 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 MRAPQ8TCY5 172 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 SFXN5Q8TD22 340 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 TFAP2CQ92754 450 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 PPWD1Q96BP3 646 aaKnown RBP4.57□□□□□ -1.68
CCDC39-205ENST00000485055 MICU1Q9BPX6 476 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 NDUFAF3Q9BU61 184 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ABHD14AQ9BUJ0 271 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 LAT2Q9GZY6 243 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 SEMA6AQ9H2E6 1030 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 RNF122Q9H9V4 155 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ISYNA1Q9NPH2 558 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 C1orf109Q9NX04 203 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 IL36GQ9NZH8 169 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 MLXQ9UH92 298 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 KIF25Q9UIL4 384 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 MRTO4Q9UKD2 239 aaKnown RBP4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ICAM5Q9UMF0 924 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ESPL1Q14674 2120 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 POLEQ07864 2286 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 TRGV5A0A0B4J1U4 118 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 A0A1B0GVI7 797 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.57□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF860A6NHJ4 632 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 TRIM49D1C9J1S8 452 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 SCO2O43819 266 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 PLIN3O60664 434 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 RAF1P04049 648 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 CCL3P10147 92 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 COX6B1P14854 86 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 CD1EP15812 388 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 S100A7P31151 101 aa4.57□□□□□ -1.68
CCDC39-205ENST00000485055 GMPRP36959 345 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms