RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 C16orf54Q6UWD8 224 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DPY19L2P2Q6ZN68 376 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 FKBP9P1Q75LS8 142 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 REC114Q7Z4M0 266 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 TSEN54Q7Z6J9 526 aaKnown RBP6.06□□□□□ -1.44
CSDE1-206ENST00000483030 SLC7A5P1Q8MH63 180 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 OR6V1Q8N148 313 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 PNKDQ8N490 385 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 GALNT4Q8N4A0 578 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 GCSAMQ8N6F7 178 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 LY6G5BQ8NDX9 201 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 SLC26A10Q8NG04 563 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 OR2AJ1Q8NGZ0 328 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 SLC7A13Q8TCU3 470 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 MRAPQ8TCY5 172 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 NPRL2Q8WTW4 380 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 HSH2DQ96JZ2 352 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 ERMAPQ96PL5 475 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-206ENST00000483030 GPX7Q96SL4 187 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-206ENST00000483030 NMNAT3Q96T66 252 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 CCL13Q99616 98 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 ADAT1Q9BUB4 502 aaKnown RBP6.06□□□□□ -1.44
CSDE1-206ENST00000483030 TMEM120AQ9BXJ8 343 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 PNRC2Q9NPJ4 139 aaKnown RBP6.06□□□□□ -1.44
CSDE1-206ENST00000483030 SIRT7Q9NRC8 400 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 INTS9Q9NV88 658 aaKnown RBP6.06□□□□□ -1.44
CSDE1-206ENST00000483030 ADA2Q9NZK5 511 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 ZNRD1Q9P1U0 126 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 KAAG1Q9UBP8 84 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 DUX4Q9UBX2 424 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 FBLN5Q9UBX5 448 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 FOXJ3Q9UPW0 622 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 AURKCQ9UQB9 309 aa6.06□□□□□ -1.44
CSDE1-206ENST00000483030 MEIOCA2RUB1 952 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 UNC119BA6NIH7 251 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 RNASEK-C17orf49H0YIS7 233 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 M0R135 149 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 EDF1O60869 148 aaKnown RBP6.05□□□□□ -1.44
CSDE1-206ENST00000483030 HLA-DQA2P01906 255 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 H1F0P07305 194 aaKnown RBP6.05□□□□□ -1.44
CSDE1-206ENST00000483030 ANOS1P23352 680 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 OMPP47874 163 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 LOXL3P58215 753 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 KLF10Q13118 480 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 KLRD1Q13241 179 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 MICBQ29980 383 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 SNAI3Q3KNW1 292 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 SLC36A3Q495N2 470 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 GLYATL3Q5SZD4 288 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 TEX36Q5VZQ5 186 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 CFAP161Q6P656 301 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 METAP1DQ6UB28 335 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-206ENST00000483030 C1orf122Q6ZSJ8 110 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 CBLL1Q75N03 491 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 CYP4Z1Q86W10 505 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 CMTM4Q8IZR5 234 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 LNX2Q8N448 690 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 SPERTQ8NA61 448 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 OR4K13Q8NH42 304 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 OR5R1Q8NH85 324 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 OR2AE1Q8NHA4 323 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 PPP1R35Q8TAP8 253 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 SPTSSAQ969W0 71 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 ITPKCQ96DU7 683 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 SEH1LQ96EE3 360 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 ZNF799Q96GE5 643 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 MAP6Q96JE9 813 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 ATP6V1G3Q96LB4 118 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 NSRP1Q9H0G5 558 aaKnown RBP6.05□□□□□ -1.44
CSDE1-206ENST00000483030 ANKRD19PQ9H560 264 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 RPRD1BQ9NQG5 326 aaKnown RBP6.05□□□□□ -1.44
CSDE1-206ENST00000483030 GID8Q9NWU2 228 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 CMTM6Q9NX76 183 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 MRPL15Q9P015 296 aaKnown RBP6.05□□□□□ -1.44
CSDE1-206ENST00000483030 CYB5R1Q9UHQ9 305 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 ENPP4Q9Y6X5 453 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 DOCK11Q5JSL3 2073 aa6.05□□□□□ -1.44
CSDE1-206ENST00000483030 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 BBIP1A8MTZ0 92 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 CXCR6O00574 342 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 BHLHE40O14503 412 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 GSTA4O15217 222 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 NDUFB3O43676 98 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 RENP00797 406 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 SERPINA1P01009 418 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 TROVE2P10155 538 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 MUC1P15941 1255 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 HIST1H1CP16403 213 aaKnown RBP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 ZNF823P16415 610 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 SAA4P35542 130 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 RPS27P42677 84 aaKnown RBP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 KIR2DS4P43632 304 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 EFNB2P52799 333 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 LIPEQ05469 1076 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 MZT1Q08AG7 82 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 SF3A3Q12874 501 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSDE1-206ENST00000483030 IKZF1Q13422 519 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 DGCR6Q14129 220 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 SEC23BQ15437 767 aa6.04□□□□□ -1.44
CSDE1-206ENST00000483030 LY6EQ16553 131 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms