RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 PRRT1Q99946 306 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 RBM24Q9BX46 236 aaKnown RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 IFT46Q9NQC8 304 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 SLC39A1Q9NY26 324 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 NOP16Q9Y3C1 178 aaKnown RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 NPIPA2E9PIF3 369 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 NPIPA3F8WFD2 350 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 LAMTOR5O43504 91 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 RP2O75695 350 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 ERCC1P07992 297 aaPredicted RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 CD34P28906 385 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 SLC6A9P48067 706 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 RAB14P61106 215 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 LSM6P62312 80 aaKnown RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 GRB2P62993 217 aaKnown RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 TCEAL6Q6IPX3 200 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 PGAP1Q75T13 922 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 TCEAL3Q969E4 200 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 PGAM5Q96HS1 289 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 IER2Q9BTL4 223 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 FOXD3Q9UJU5 478 aaPredicted RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 NCKAP5O14513 1909 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 RFPL4AA6NLU0 287 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 RFPL4AL1F8VTS6 287 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 TLX3O43711 291 aaPredicted RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 CRTAPO75718 401 aaPredicted RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 NMBP08949 121 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 FAHP16930 419 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 MPZP25189 248 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 FKBP2P26885 142 aaKnown RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 AVPR2P30518 371 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 B3GALT5-AS1P59052 145 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 UBE2V2Q15819 145 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 MICBQ29980 383 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 LRRC37A5PQ49AS3 106 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 YRDCQ86U90 279 aaKnown RBP12.35□□□□□ -0.43
PHF3-204ENST00000481385 OR10K1Q8NGX5 313 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 COQ8AQ8NI60 647 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 ARHGAP5-AS1Q96IT6 56 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 MFFQ9GZY8 342 aa12.35□□□□□ -0.43
PHF3-204ENST00000481385 SHOXO15266 292 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 RFPL3SP0C7P2 107 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 HIST1H1DP16402 221 aaKnown RBP12.34□□□□□ -0.43
PHF3-204ENST00000481385 FOLR3P41439 243 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 PRSS12P56730 875 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 TRA2AQ13595 282 aaKnown RBP eCLIP12.34□□□□□ -0.43
PHF3-204ENST00000481385 ZNF660Q6AZW8 331 aaPredicted RBP12.34□□□□□ -0.43
PHF3-204ENST00000481385 GSG1LQ6UXU4 331 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 BEST3Q8N1M1 668 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 GPER1Q99527 375 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 MICU1Q9BPX6 476 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 REG4Q9BYZ8 158 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 ZNF224Q9NZL3 707 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 FRYQ5TBA9 3013 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 C9orf170A2RU37 121 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 DHHO43323 396 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 CTSSP25774 331 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 MPGP29372 298 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 ZNF133P52736 654 aaPredicted RBP12.34□□□□□ -0.43
PHF3-204ENST00000481385 SNAI3Q3KNW1 292 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 PPP1R32Q7Z5V6 425 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 LYG2Q86SG7 212 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 MARCH1Q8TCQ1 289 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 WDR13Q9H1Z4 485 aa12.34□□□□□ -0.43
PHF3-204ENST00000481385 OR5H14A6NHG9 310 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 SPDEFO95238 335 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 CER1O95813 267 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 F10P00742 488 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 CD8AP01732 235 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 RPA2P15927 270 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 AKR1C4P17516 323 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 C4BPBP20851 252 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 OTX2P32243 289 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 KISS1Q15726 138 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 OR2W3Q7Z3T1 314 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 DTWD2Q8NBA8 298 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 GJC3Q8NFK1 279 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 OR4K15Q8NH41 348 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 MARVELD3Q96A59 401 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 RDH8Q9NYR8 311 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 KIF25Q9UIL4 384 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 COL27A1Q8IZC6 1860 aaPredicted RBP12.33□□□□□ -0.44
PHF3-204ENST00000481385 EFSO43281 561 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 EIF1BO60739 113 aaKnown RBP12.33□□□□□ -0.44
PHF3-204ENST00000481385 IL2RAP01589 272 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 RLN2P04090 185 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 GSK3AP49840 483 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 RAC1P63000 192 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 HIST1H3AP68431 136 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 HGFACQ04756 655 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 CLVS2Q5SYC1 327 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 HIST2H3PS2Q5TEC6 136 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 HIST2H3AQ71DI3 136 aa12.33□□□□□ -0.44
PHF3-204ENST00000481385 TMEM105Q8N8V8 129 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms