RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 UBE2E2Q96LR5 201 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 TM2D1Q9BX74 207 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 SLC19A3Q9BZV2 496 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 PRORYQ9H606 182 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 C12orf4Q9NQ89 552 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 XPNPEP1Q9NQW7 623 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 FBXO8Q9NRD0 319 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 DEPPQ9NTK1 212 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 KCNIP1Q9NZI2 227 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 THYN1Q9P016 225 aa6.6□□□□□ -1.35
LSM5-210ENST00000480956 ROCK2O75116 1388 aaKnown RBP6.6□□□□□ -1.35
LSM5-210ENST00000480956 ARID1BQ8NFD5 2236 aaPredicted RBP6.6□□□□□ -1.35
LSM5-210ENST00000480956 POLR2AP24928 1970 aaKnown RBP6.59□□□□□ -1.35
LSM5-210ENST00000480956 RALGAPBQ86X10 1494 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 MSGN1A6NI15 193 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 ZNF705EA8MWA4 302 aaPredicted RBP6.59□□□□□ -1.35
LSM5-210ENST00000480956 E9PLD3 99 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 M0R1B8 84 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 SCRG1O75711 98 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 TNFRSF1BP20333 461 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 IGFBP5P24593 272 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 RPL19P84098 196 aaKnown RBP6.59□□□□□ -1.35
LSM5-210ENST00000480956 SEMG2Q02383 582 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 TWF1Q12792 350 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 CLINT1Q14677 625 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 FHL5Q5TD97 284 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 TRIQKQ629K1 86 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 TLNRD1Q9H1K6 362 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 DDX19AQ9NUU7 478 aaKnown RBP6.59□□□□□ -1.35
LSM5-210ENST00000480956 RIMS2Q9UQ26 1411 aa6.59□□□□□ -1.35
LSM5-210ENST00000480956 CPDO75976 1380 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 DHFRP00374 187 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 SELEP16581 610 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 USF1P22415 310 aaPredicted RBP6.59□□□□□ -1.36
LSM5-210ENST00000480956 GDF1P27539 372 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 GPX4P36969 197 aaPredicted RBP6.59□□□□□ -1.36
LSM5-210ENST00000480956 GALR1P47211 349 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 TMEM33P57088 247 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 ERVPABLB-1P60509 514 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 ERVK-16P61578 105 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 PPP1CBP62140 327 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 ZNF92Q03936 586 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 CST9Q5W186 159 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 CPNE9Q8IYJ1 553 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 LGI3Q8N145 548 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 SPICQ8N5J4 248 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 OR4K17Q8NGC6 315 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 PRSS3P2Q8NHM4 247 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 FRAT1Q92837 279 aaPredicted RBP6.59□□□□□ -1.36
LSM5-210ENST00000480956 FGGYQ96C11 551 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 MRAP2Q96G30 205 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 HOPXQ9BPY8 73 aaPredicted RBP6.59□□□□□ -1.36
LSM5-210ENST00000480956 QTRT1Q9BXR0 403 aaKnown RBP6.59□□□□□ -1.36
LSM5-210ENST00000480956 EBF2Q9HAK2 575 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 EXOSC4Q9NPD3 245 aaKnown RBP6.59□□□□□ -1.36
LSM5-210ENST00000480956 PSG11Q9UQ72 335 aa6.59□□□□□ -1.36
LSM5-210ENST00000480956 ZNF142P52746 1687 aaPredicted RBP6.58□□□□□ -1.36
LSM5-210ENST00000480956 MYOM2P54296 1465 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 EVPLQ92817 2033 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 FANCIQ9NVI1 1328 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 NCBP2LA6PVI3 153 aaKnown RBP6.58□□□□□ -1.36
LSM5-210ENST00000480956 KPNA3O00505 521 aaPredicted RBP6.58□□□□□ -1.36
LSM5-210ENST00000480956 AZIN1O14977 448 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 CD5P06127 495 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 SNRPCP09234 159 aaKnown RBP6.58□□□□□ -1.36
LSM5-210ENST00000480956 CD36P16671 472 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 SHC1P29353 583 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 OR12D2P58182 307 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 ATP6AP1Q15904 470 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 MAPK14Q16539 360 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 MUC21Q5SSG8 566 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 MARC1Q5VT66 337 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 TMEM179Q6ZVK1 233 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 NRMQ8IXM6 262 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 DAW1Q8N136 415 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 PNKDQ8N490 385 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 ZNF491Q8N8L2 437 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 C9orf85Q96MD7 179 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 FAM107BQ9H098 131 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 SIX2Q9NPC8 291 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 FAM206AQ9NX38 181 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 TAS2R13Q9NYV9 303 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 TMEM181Q9P2C4 612 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 NRXN3Q9Y4C0 1643 aa6.58□□□□□ -1.36
LSM5-210ENST00000480956 UHRF1BP1Q6BDS2 1440 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 A0A1B0GV72 72 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 A6NDN8 102 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 SRRM3A6NNA2 597 aaPredicted RBP6.57□□□□□ -1.36
LSM5-210ENST00000480956 TNFRSF11BO00300 401 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 DPM1O60762 260 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 CNIH1O95406 144 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 NUDT3O95989 172 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 PRSS2P07478 247 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 RORCP51449 518 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 ZNF121P58317 390 aaPredicted RBP6.57□□□□□ -1.36
LSM5-210ENST00000480956 TNFRSF9Q07011 255 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 KIAA0141Q14154 515 aaPredicted RBP6.57□□□□□ -1.36
LSM5-210ENST00000480956 ZNF544Q6NX49 715 aa6.57□□□□□ -1.36
LSM5-210ENST00000480956 STK40Q8N2I9 435 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms