RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CYB5R3P00387 301 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-218ENST00000479554 LCATP04180 440 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 RPS2P15880 293 aaKnown RBP12.03□□□□□ -0.48
ATG4B-218ENST00000479554 ZNF823P16415 610 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 ZNF12P17014 697 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 CFPP27918 469 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 ALDH3B2P48448 385 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 TPTEP56180 551 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 PRSS12P56730 875 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 CDK5Q00535 292 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 MALLQ13021 153 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 ZNF154Q13106 437 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 GK2Q14410 553 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-218ENST00000479554 RSPO1Q2MKA7 263 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-218ENST00000479554 C1orf87Q8N0U7 546 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 PROKR2Q8NFJ6 384 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 Q96MT0 163 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 DUSP21Q9H596 190 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
ATG4B-218ENST00000479554 TBC1D23Q9NUY8 699 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 TMEM100Q9NV29 134 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 MRPL22Q9NWU5 206 aaKnown RBP12.03□□□□□ -0.48
ATG4B-218ENST00000479554 CLN6Q9NWW5 311 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 INSIG2Q9Y5U4 225 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 SNX5Q9Y5X3 404 aa12.03□□□□□ -0.48
ATG4B-218ENST00000479554 ARHGAP32A7KAX9 2087 aa12.02□□□□□ -0.48
ATG4B-218ENST00000479554 M0R135 149 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 XPNPEP2O43895 674 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 ZNF205O95201 554 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 PYCR1P32322 319 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 ZNF181Q2M3W8 571 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 PGAP1Q75T13 922 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 CYB561A3Q8NBI2 242 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 OR8J1Q8NGP2 316 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 OR2T4Q8NH00 348 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 DVL3Q92997 716 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-218ENST00000479554 SPTSSAQ969W0 71 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 ZNF799Q96GE5 643 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 MAP6Q96JE9 813 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 SSBP3Q9BWW4 388 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-218ENST00000479554 ESM1Q9NQ30 184 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 IL20Q9NYY1 176 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 AASSQ9UDR5 926 aa12.02□□□□□ -0.49
ATG4B-218ENST00000479554 A0A1B0GWJ7 208 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 TMEM89A2RUT3 159 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 TVP23AA6NH52 213 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 PTGES3LE9PB15 166 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 BHLHE40O14503 412 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 HLA-DPB1P04440 258 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 IRF2P14316 349 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 JUNBP17275 347 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-218ENST00000479554 CPT2P23786 658 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 RPS27P42677 84 aaKnown RBP12.01□□□□□ -0.49
ATG4B-218ENST00000479554 COMPP49747 757 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-218ENST00000479554 GNB2P62879 340 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 SLC35A2P78381 396 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 SMN1Q16637 294 aaKnown RBP12.01□□□□□ -0.49
ATG4B-218ENST00000479554 RBMS3Q6XE24 437 aaKnown RBP12.01□□□□□ -0.49
ATG4B-218ENST00000479554 KCTD8Q6ZWB6 473 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 MRPL21Q7Z2W9 205 aaKnown RBP12.01□□□□□ -0.49
ATG4B-218ENST00000479554 NAA40Q86UY6 237 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 SATL1Q86VE3 508 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 KLBQ86Z14 1044 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 IQCF1Q8N6M8 205 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 ZDHHC22Q8N966 263 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 OR8D4Q8NGM9 314 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 SPRYD4Q8WW59 207 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-218ENST00000479554 TSSK6Q9BXA6 273 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 PLA2G12AQ9BZM1 189 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 TMEM165Q9HC07 324 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 MIOXQ9UGB7 285 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 NUP50Q9UKX7 468 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 NOP16Q9Y3C1 178 aaKnown RBP12.01□□□□□ -0.49
ATG4B-218ENST00000479554 PPIAL4AQ9Y536 164 aa12.01□□□□□ -0.49
ATG4B-218ENST00000479554 RGS10O43665 173 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 HMGN1P05114 100 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 WNT2P09544 360 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 CD200P41217 278 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 GATA4P43694 442 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 UBA52P62987 128 aaKnown RBP12□□□□□ -0.49
ATG4B-218ENST00000479554 SNAPC1Q16533 368 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 OCLNQ16625 522 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 ZNF404Q494X3 552 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 KLF17Q5JT82 389 aaPredicted RBP12□□□□□ -0.49
ATG4B-218ENST00000479554 SLC25A30Q5SVS4 291 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 MEDAGQ5VYS4 303 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 BTNL3Q6UXE8 466 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 NLRC3Q7RTR2 1065 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 SPARTQ8N0X7 666 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 SVOPQ8N4V2 548 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 CELF2-AS1Q8N7Q2 184 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 C3orf56Q8N813 242 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 TCEANCQ8N8B7 351 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 SLC37A3Q8NCC5 494 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 OR2T33Q8NG76 320 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 OR8B3Q8NGG8 313 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 OR51L1Q8NGJ5 315 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 OR10S1Q8NGN2 331 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 OR9Q1Q8NGQ5 310 aa12□□□□□ -0.49
ATG4B-218ENST00000479554 OR11L1Q8NGX0 322 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms