RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 FJX1Q86VR8 437 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.76□□□□□ -1.49
USP48-208ENST00000479177 ZNF584Q8IVC4 421 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 ELMOD2Q8IZ81 293 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 ZNF283Q8N7M2 679 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 CPEB3Q8NE35 698 aaKnown RBP5.76□□□□□ -1.49
USP48-208ENST00000479177 OR8B12Q8NGG6 310 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 OR13C5Q8NGS8 318 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 OR10AC1Q8NH08 325 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 OR5AK2Q8NH90 309 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 TMEM203Q969S6 136 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 SPTSSAQ969W0 71 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 C12orf43Q96C57 262 aaKnown RBP5.76□□□□□ -1.49
USP48-208ENST00000479177 DGCR14Q96DF8 476 aaKnown RBP5.76□□□□□ -1.49
USP48-208ENST00000479177 ZNF799Q96GE5 643 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 CHCHD6Q9BRQ6 235 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 CENPOQ9BU64 300 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 PBOV1Q9GZY1 135 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 COMMD4Q9H0A8 199 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 RNF121Q9H920 327 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 OR52A1Q9UKL2 312 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 GTF2A1LQ9UNN4 478 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 AMDHD2Q9Y303 409 aa5.76□□□□□ -1.49
USP48-208ENST00000479177 PKDREJQ9NTG1 2253 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 LOC100509620A0A075B734 347 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 LOC100506127A0A0U1RQW1 187 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 A0A1B0GUH1 482 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 TRDV1A0A1B0GX56 115 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 A0A1W2PR80 420 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 C5orf63A6NC05 138 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ACOD1A6NK06 481 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 F5H5K5 113 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 SLC22A1O15245 554 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 IGLV1-44P01699 117 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 TTRP02766 147 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 PRB1P04280 392 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 SERPINA5P05154 406 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ANXA2P07355 339 aaKnown RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 UBCP0CG48 685 aaKnown RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 ZNF14P17017 642 aaPredicted RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 NAT1P18440 290 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 APEX1P27695 318 aaKnown RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 FGF9P31371 208 aaPredicted RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 TGFBR1P36897 503 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 SLC6A9P48067 706 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ASCL1P50553 236 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 TPTEP56180 551 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 VBP1P61758 197 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 NCS1P62166 190 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 LSM3P62310 102 aaKnown RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 RAB1AP62820 205 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 PLP2Q04941 152 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 INSL4Q14641 139 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 SPCS2Q15005 226 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 IGFBP7Q16270 282 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 FBXL19-AS1Q494R0 122 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 YIF1BQ5BJH7 314 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 TIMM23BQ5SRD1 257 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 C1QTNF12Q5T7M4 302 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ZNF704Q6ZNC4 412 aaPredicted RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 TMEM91Q6ZNR0 172 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 GDPGP1Q6ZNW5 385 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 FAM57BQ71RH2 274 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 MYPOPQ86VE0 399 aaPredicted RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 MS4A15Q8N5U1 240 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ZNF676Q8N7Q3 588 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 STEAP2Q8NFT2 490 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 NDNFQ8TB73 568 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ASB5Q8WWX0 329 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 S100PBPQ96BU1 408 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 POM121L2Q96KW2 1035 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 C1QTNF5Q9BXJ0 243 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 HDHD5Q9BXW7 423 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ACTR6Q9GZN1 396 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 OR10A4Q9H209 315 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 RNF167Q9H6Y7 350 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 EXOSC4Q9NPD3 245 aaKnown RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 TXNL4BQ9NX01 149 aaKnown RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 ELOVL5Q9NYP7 299 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ZNF319Q9P2F9 582 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 CRNNQ9UBG3 495 aaPredicted RBP5.75□□□□□ -1.49
USP48-208ENST00000479177 SSR3Q9UNL2 185 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 SLC25A15Q9Y619 301 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 ATP23Q9Y6H3 246 aa5.75□□□□□ -1.49
USP48-208ENST00000479177 USP9YO00507 2555 aaPredicted RBP5.74□□□□□ -1.49
USP48-208ENST00000479177 HEATR1Q9H583 2144 aaKnown RBP5.74□□□□□ -1.49
USP48-208ENST00000479177 TRBV5-7A0A0A0MS05 114 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 A0A0U1RQV5 110 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 A0A1B0GTI1 187 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 IQCMA0A1B0GVH7 501 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 A0A1W2PPW3 197 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 C5orf49A4QMS7 147 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 ZNF879B4DU55 563 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 C16orf97H3BN30 126 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 P2RY10O00398 339 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 GATBO75879 557 aaKnown RBP5.74□□□□□ -1.49
USP48-208ENST00000479177 SERPINA3P01011 423 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 IGKV3-15P01624 115 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 IGLV3-1P01715 115 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 ISG15P05161 165 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms