RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 DPY19L2P2Q6ZN68 376 aa14□□□□□ -0.17
VIM-204ENST00000478746 VTCN1Q7Z7D3 282 aa14□□□□□ -0.17
VIM-204ENST00000478746 NDUFA11Q86Y39 141 aa14□□□□□ -0.17
VIM-204ENST00000478746 OR6V1Q8N148 313 aa14□□□□□ -0.17
VIM-204ENST00000478746 SLC26A10Q8NG04 563 aa14□□□□□ -0.17
VIM-204ENST00000478746 OR2AE1Q8NHA4 323 aa14□□□□□ -0.17
VIM-204ENST00000478746 C8orf46Q8TAG6 207 aa14□□□□□ -0.17
VIM-204ENST00000478746 SLC7A13Q8TCU3 470 aa14□□□□□ -0.17
VIM-204ENST00000478746 C17orf50Q8WW18 174 aa14□□□□□ -0.17
VIM-204ENST00000478746 RORBQ92753 470 aa14□□□□□ -0.17
VIM-204ENST00000478746 ZNF799Q96GE5 643 aa14□□□□□ -0.17
VIM-204ENST00000478746 FAM46AQ96IP4 442 aaKnown RBP14□□□□□ -0.17
VIM-204ENST00000478746 NPFFR1Q9GZQ6 430 aa14□□□□□ -0.17
VIM-204ENST00000478746 PNRC2Q9NPJ4 139 aaKnown RBP14□□□□□ -0.17
VIM-204ENST00000478746 ADA2Q9NZK5 511 aa14□□□□□ -0.17
VIM-204ENST00000478746 CYB5R1Q9UHQ9 305 aa14□□□□□ -0.17
VIM-204ENST00000478746 ACOT8O14734 319 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 NPPAP01160 153 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 CD28P10747 220 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 TGM4P49221 684 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 LRRC75BQ2VPJ9 315 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 RFX4Q33E94 735 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 ZBTB37Q5TC79 503 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 CRIP3Q6Q6R5 217 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 C11orf53Q8IXP5 236 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 LNX2Q8N448 690 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 SPTSSAQ969W0 71 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 MEGF9Q9H1U4 602 aa13.99□□□□□ -0.17
VIM-204ENST00000478746 METTL8Q9H825 291 aaKnown RBP13.99□□□□□ -0.17
VIM-204ENST00000478746 SF3B6Q9Y3B4 125 aaKnown RBP13.99□□□□□ -0.17
VIM-204ENST00000478746 A0A0G2JND7 137 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 K7EIL1 84 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 M0R1W7 72 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 HLA-DQA2P01906 255 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 IGLL1P15814 213 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 CD33P20138 364 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 BLMHQ13867 455 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 COQ5Q5HYK3 327 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 GLYATL3Q5SZD4 288 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 DPY19L4Q7Z388 723 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 OR2T12Q8NG77 320 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 OR5T2Q8NGG2 359 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 OR56B2PQ8NGI1 322 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 OR9Q1Q8NGQ5 310 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 OR8S1Q8NH09 359 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 SEH1LQ96EE3 360 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 WWC2-AS2Q96NR7 200 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 ERMAPQ96PL5 475 aaPredicted RBP13.98□□□□□ -0.17
VIM-204ENST00000478746 FAM53CQ9NYF3 392 aa13.98□□□□□ -0.17
VIM-204ENST00000478746 FAM220BPB1ANY3 271 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 MRASO14807 208 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 RENP00797 406 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 AMY2BP19961 511 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 NAA10P41227 235 aaPredicted RBP13.97□□□□□ -0.17
VIM-204ENST00000478746 FXYD6P3P58550 94 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 AANATQ16613 207 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 ATPAF1Q5TC12 328 aaPredicted RBP13.97□□□□□ -0.17
VIM-204ENST00000478746 CCBE1Q6UXH8 406 aaPredicted RBP13.97□□□□□ -0.17
VIM-204ENST00000478746 C12orf43Q96C57 262 aaKnown RBP13.97□□□□□ -0.17
VIM-204ENST00000478746 RSRC1Q96IZ7 334 aaKnown RBP13.97□□□□□ -0.17
VIM-204ENST00000478746 NMNAT3Q96T66 252 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 NKX3-1Q99801 234 aaPredicted RBP13.97□□□□□ -0.17
VIM-204ENST00000478746 SIKE1Q9BRV8 207 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 TMEM120AQ9BXJ8 343 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 NSRP1Q9H0G5 558 aaKnown RBP13.97□□□□□ -0.17
VIM-204ENST00000478746 ANKRD19PQ9H560 264 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 CCDC134Q9H6E4 229 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 CAPN7Q9Y6W3 813 aa13.97□□□□□ -0.17
VIM-204ENST00000478746 DNAH9Q9NYC9 4486 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 A0A1W2PQ09 198 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 ANKRD30BLA7E2S9 258 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 BBIP1A8MTZ0 92 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.96□□□□□ -0.17
VIM-204ENST00000478746 ZNF682O95780 498 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 TROVE2P10155 538 aaKnown RBP eCLIP13.96□□□□□ -0.17
VIM-204ENST00000478746 SELLP14151 372 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 POU1F1P28069 291 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 DDOSTP39656 456 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 GYS2P54840 703 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 DRAM2Q6UX65 266 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 WDR82Q6UXN9 313 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 FKBP9P1Q75LS8 142 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 WFDC9Q8NEX5 89 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 OR1M1Q8NGA1 313 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 MAP6Q96JE9 813 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 CITED2Q99967 270 aaPredicted RBP13.96□□□□□ -0.17
VIM-204ENST00000478746 RPRD1BQ9NQG5 326 aaKnown RBP13.96□□□□□ -0.17
VIM-204ENST00000478746 SERTAD4Q9NUC0 356 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 N6AMT1Q9Y5N5 214 aa13.96□□□□□ -0.17
VIM-204ENST00000478746 UNC119BA6NIH7 251 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 ADARB2-AS1A8MUL3 147 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 EDF1O60869 148 aaKnown RBP13.95□□□□□ -0.18
VIM-204ENST00000478746 ANOS1P23352 680 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 PAX6P26367 422 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 OMPP47874 163 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 GSK3BP49841 420 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 CSNK2BP67870 215 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 IFI44LQ53G44 452 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 SMARCD3Q6STE5 483 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 LIAT1Q6ZQX7 453 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms