RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 GNG8Q9UK08 70 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 DIMT1Q9UNQ2 313 aaKnown RBP22.75■■□□□ 1.23
CCM2-211ENST00000478582 RPP14O95059 124 aaKnown RBP22.74■■□□□ 1.23
CCM2-211ENST00000478582 TTRP02766 147 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 GSK3AP49840 483 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 OR12D2P58182 307 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 TSTQ16762 297 aaKnown RBP22.74■■□□□ 1.23
CCM2-211ENST00000478582 CLEC2AQ6UVW9 174 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 CATSPERDQ86XM0 798 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 OR56B2PQ8NGI1 322 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 PPP1R14AQ96A00 147 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 RHNO1Q9BSD3 238 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 EGLN1Q9GZT9 426 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 DECR2Q9NUI1 292 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 PSORS1C1Q9UIG5 152 aa22.74■■□□□ 1.23
CCM2-211ENST00000478582 EFCAB10A6NFE3 127 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 LIMS3P0CW19 117 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 LIMS4P0CW20 117 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 TNFSF4P23510 183 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 PDLIM4P50479 330 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 TNFAIP6P98066 277 aaPredicted RBP22.73■■□□□ 1.23
CCM2-211ENST00000478582 GFOD2Q3B7J2 385 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 C6orf141Q5SZD1 244 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 BCL2L15Q5TBC7 163 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 FDX2Q6P4F2 183 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 OR2Z1Q8NG97 314 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 FAM168AQ92567 244 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 RDH5Q92781 318 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 ELMOD3Q96FG2 381 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 TMEM80Q96HE8 168 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 RASSF4Q9H2L5 321 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 ACOXLQ9NUZ1 547 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 IL19Q9UHD0 177 aa22.73■■□□□ 1.23
CCM2-211ENST00000478582 LOC390937A0A1W2PQ73 354 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 NDUFS8O00217 210 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 MLNRO43193 412 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 XPNPEP2O43895 674 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 ATP6V1B1P15313 513 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 CRYBB2P43320 205 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 SNCBQ16143 134 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 CSNK2A3Q8NEV1 391 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 BPIFB6Q8NFQ5 453 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 C10orf105Q8TEF2 133 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 C4orf36Q96KX1 117 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 SAP30LQ9HAJ7 183 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 FKBP14Q9NWM8 211 aa22.72■■□□□ 1.23
CCM2-211ENST00000478582 NOP16Q9Y3C1 178 aaKnown RBP22.72■■□□□ 1.23
CCM2-211ENST00000478582 NIPBLQ6KC79 2804 aaeCLIP22.72■■□□□ 1.231e-6■■■■■ 35.4
CCM2-211ENST00000478582 J3QLW9 94 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 GMDSO60547 372 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 ZNF19P17023 458 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 Q6ZSR3 168 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 KRT74Q7RTS7 529 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 KLBQ86Z14 1044 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 OR51E1Q8TCB6 317 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 PELI1Q96FA3 418 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 ZNF184Q99676 751 aaPredicted RBP22.71■■□□□ 1.23
CCM2-211ENST00000478582 GTF2A1LQ9UNN4 478 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 SLC22A13Q9Y226 551 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 EXOSC1Q9Y3B2 195 aaKnown RBP22.71■■□□□ 1.23
CCM2-211ENST00000478582 CSPG4Q6UVK1 2322 aa22.71■■□□□ 1.23
CCM2-211ENST00000478582 H0YL77 283 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 TPD52L2O43399 206 aaKnown RBP22.7■■□□□ 1.22
CCM2-211ENST00000478582 COL8A2P25067 703 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 GIFP27352 417 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 ETV1P50549 477 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 ST3GAL4Q11206 333 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 MRPL28Q13084 256 aaKnown RBP22.7■■□□□ 1.22
CCM2-211ENST00000478582 PRSS35Q8N3Z0 413 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 PLPP7Q8NBV4 271 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 SOX7Q9BT81 388 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 ISG20L2Q9H9L3 353 aaKnown RBP22.7■■□□□ 1.22
CCM2-211ENST00000478582 GPR84Q9NQS5 396 aa22.7■■□□□ 1.22
CCM2-211ENST00000478582 CAB39Q9Y376 341 aaPredicted RBP22.7■■□□□ 1.22
CCM2-211ENST00000478582 IGHV1-69-2A0A0G2JMI3 117 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 A0A1B0GTI1 187 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 ANKRD30BLA7E2S9 258 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 TNFRSF1AP19438 455 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 ACHEP22303 614 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 CA6P23280 308 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 ACKR3P25106 362 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 PSMB10P40306 273 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 MAP2K3P46734 347 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 CCR9P51686 369 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 WDR38Q5JTN6 314 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 MAPK1IP1LQ8NDC0 245 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 OR10AD1Q8NGE0 317 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 OR2G2Q8NGZ5 317 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 HAVCR2Q8TDQ0 301 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 YIPF5Q969M3 257 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 CHODLQ9H9P2 273 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 CR1P17927 2039 aa22.69■■□□□ 1.22
CCM2-211ENST00000478582 IGHV4-30-2A0A087WSY4 118 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 VWC2LB2RUY7 222 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 LYNX1G3V0Z9 82 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 SLC1A7O00341 560 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 MTRF1O75570 445 aaKnown RBP22.68■■□□□ 1.22
CCM2-211ENST00000478582 RP2O75695 350 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 HLA-DPB1P04440 258 aa22.68■■□□□ 1.22
CCM2-211ENST00000478582 LYNX1P0DP58 116 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms