RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PATE1Q8WXA2 126 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 CNDP1Q96KN2 507 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 NAPGQ99747 312 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR2AG1Q9H205 316 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 PPA2Q9H2U2 334 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 MRM3Q9HC36 420 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 NLE1Q9NVX2 485 aaPredicted RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 NMRK1Q9NWW6 199 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 DCAF16Q9NXF7 216 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 HEBP2Q9Y5Z4 205 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 CDH10Q9Y6N8 788 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 TLN1Q9Y490 2541 aaKnown RBP2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 MGAQ8IWI9 3026 aa2.79□□□□□ -1.96
CDC42BPA-212ENST00000478573 BAHCC1Q9P281 2608 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 PHF3Q92576 2039 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 KIAA1549Q9HCM3 1950 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 NCKAP5O14513 1909 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 A0A0J9YXY3 114 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 PSMB11A5LHX3 300 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 MGAT4DA6NG13 374 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 A6NIZ1 184 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR5B21A6NL26 309 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF716A6NP11 495 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 PDZK1P1A8MUH7 402 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 LIN7AO14910 233 aaPredicted RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 RAD1O60671 282 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CDK14O94921 469 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 TNFSF15O95150 251 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 FTH1P02794 183 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 GAPDHP04406 335 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 PIRTP0C851 137 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF735P0CB33 412 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 TCP1P17987 556 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 TBPP20226 339 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 GABRR1P24046 479 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CXCR2P25025 360 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 VHLP40337 213 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 NSG1P42857 185 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 MAGEA6P43360 314 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 YAP1P46937 504 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CD151P48509 253 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 SUCLG1P53597 346 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 RAP1BP61224 184 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 LYZP61626 148 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 GNG11P61952 73 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 SELENOTP62341 195 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 IFFO1Q0D2I5 559 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 SCRN3Q0VDG4 424 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 MRPL28Q13084 256 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CASP8Q14790 479 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CHRNA6Q15825 494 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 KCTD21Q4G0X4 260 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF658BQ4V348 819 aaPredicted RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 TIGD3Q6B0B8 471 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 TMEM220Q6QAJ8 160 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 FAM151BQ6UXP7 276 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CERS6Q6ZMG9 384 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 OOSP2Q86WS3 158 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF547Q8IVP9 402 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 MREGQ8N565 214 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR4K2Q8NGD2 314 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR56B2PQ8NGI1 322 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR13C4Q8NGS5 318 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 AKR7LQ8NHP1 331 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 NEIL3Q8TAT5 605 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 FAM110BQ8TC76 370 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 DCUN1D1Q96GG9 259 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 DNAJC1Q96KC8 554 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 C9orf72Q96LT7 481 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CATSPER2Q96P56 530 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CNN2Q99439 309 aaKnown RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 FAIM2Q9BWQ8 316 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 CHRNA10Q9GZZ6 450 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 ASB8Q9H765 288 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 KIR3DX1Q9H7L2 352 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 IL26Q9NPH9 171 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 FBXO8Q9NRD0 319 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 AIG1Q9NVV5 245 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 PISDQ9UG56 409 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 PACSIN2Q9UNF0 486 aaPredicted RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 TFR2Q9UP52 801 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 ASF1AQ9Y294 204 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 BTRCQ9Y297 605 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF256Q9Y2P7 627 aaPredicted RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 KCNIP3Q9Y2W7 256 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 PCYT1BQ9Y5K3 369 aaPredicted RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 N6AMT1Q9Y5N5 214 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 ARL5AQ9Y689 179 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 GTF3C1Q12789 2109 aa2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 NCOA6Q14686 2063 aaPredicted RBP2.78□□□□□ -1.96
CDC42BPA-212ENST00000478573 LOC400499M0QZD8 3231 aa2.78□□□□□ -1.97
CDC42BPA-212ENST00000478573 CACNA1CQ13936 2221 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 ESPL1Q14674 2120 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 HIVEP3Q5T1R4 2406 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC5A10A0PJK1 596 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 FAM231BA6NCW3 169 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 E9PBE3 544 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 PGRMC1O00264 195 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 ABCD4O14678 606 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 UPK3AO75631 287 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms