RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, human

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM13-208	ENST00000478111	OR4C15	Q8NGM1	316 aa		13.78	□□□□□ -0.2
TRIM13-208	ENST00000478111	DYRK2	Q92630	601 aa		13.78	□□□□□ -0.2
TRIM13-208	ENST00000478111	CDRT15	Q96T59	188 aa		13.78	□□□□□ -0.2
TRIM13-208	ENST00000478111	COPS4	Q9BT78	406 aa		13.78	□□□□□ -0.2
TRIM13-208	ENST00000478111	TRIM15	Q9C019	465 aa		13.78	□□□□□ -0.2
TRIM13-208	ENST00000478111	KIF17	Q9P2E2	1029 aa		13.78	□□□□□ -0.2
TRIM13-208	ENST00000478111	DUX4	Q9UBX2	424 aa		13.78	□□□□□ -0.2
TRIM13-208	ENST00000478111	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.78	□□□□□ -0.2
TRIM13-208	ENST00000478111	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	ZNF593	O00488	134 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	GPR137B	O60478	399 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	KRT36	O76013	467 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	ECD	O95905	644 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	GYPB	P06028	91 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	SPARC	P09486	303 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	ENTPD1	P49961	510 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	FAM3A	P98173	230 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	CRMP1	Q14194	572 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	SAMD4B	Q5PRF9	694 aa	Known RBP	13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	ASPHD2	Q6ICH7	369 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	BRICD5	Q6PL45	260 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	RASSF6	Q6ZTQ3	369 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	PRSS45	Q7RTY3	260 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	PGAM4	Q8N0Y7	254 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	LY6G5B	Q8NDX9	201 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	OR52L1	Q8NGH7	329 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	OR4Q3	Q8NH05	313 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	LINC01006	Q8NI28	216 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	TBC1D15	Q8TC07	691 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	SGK3	Q96BR1	496 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	OPA3	Q9H6K4	179 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	PPP1R3E	Q9H7J1	279 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	CNTD2	Q9H8S5	307 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	RNPEPL1	Q9HAU8	725 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	CENPM	Q9NSP4	180 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	C14orf119	Q9NWQ9	140 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	N6AMT1	Q9Y5N5	214 aa		13.77	□□□□□ -0.21
TRIM13-208	ENST00000478111	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	hCG_1807616	A0A1W2PRN6	198 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111		A6NLC8	198 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	XRCC2	O43543	280 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	SNX3	O60493	162 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	CLU	P10909	449 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	SPI1	P17947	270 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	AMY2B	P19961	511 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	FMO3	P31513	532 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	DDOST	P39656	456 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	PROK1	P58294	105 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	CDON	Q4KMG0	1287 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	KLHL12	Q53G59	568 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	HSP90B2P	Q58FF3	399 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	LINC01590	Q5TEZ4	76 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	WDR82	Q6UXN9	313 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	SLC16A9	Q7RTY1	509 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	PDZD9	Q8IXQ8	264 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	OR1M1	Q8NGA1	313 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	SEH1L	Q96EE3	360 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	CCL13	Q99616	98 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	MED4	Q9NPJ6	270 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	RNF114	Q9Y508	228 aa		13.76	□□□□□ -0.21
TRIM13-208	ENST00000478111	DHRS12	A0PJE2	317 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	ZNF878	C9JN71	531 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	TNFRSF11B	O00300	401 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	CLPX	O76031	633 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	MUC1	P15941	1255 aa	Predicted RBP	13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	MAGEA2	P43356	314 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	SLC25A1	P53007	311 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	CSNK2B	P67870	215 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	MZT1	Q08AG7	82 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	PPP1R8	Q12972	351 aa	Known RBP	13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	TAF13	Q15543	124 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	WDR38	Q5JTN6	314 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	VMO1	Q7Z5L0	202 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	LINC00471	Q8N535	108 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	LRRC29	Q8WV35	223 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	ST8SIA4	Q92187	359 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	CCT8L2	Q96SF2	557 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	TSSK6	Q9BXA6	273 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	ZNF319	Q9P2F9	582 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	KPTN	Q9Y664	436 aa		13.75	□□□□□ -0.21
TRIM13-208	ENST00000478111	hCG_38984	A0A1B0GV85	526 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	ANKRD30BL	A7E2S9	258 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	TBX1	O43435	398 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	CX3CR1	P49238	355 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	MICB	Q29980	383 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111		Q6ZSV7	163 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	DPY19L4	Q7Z388	723 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	SCCPDH	Q8NBX0	429 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	OR8S1	Q8NH09	359 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	REEP6	Q96HR9	211 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	RBM4B	Q9BQ04	359 aa	Known RBP	13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	TLNRD1	Q9H1K6	362 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	SEMA6A	Q9H2E6	1030 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	MMP27	Q9H306	513 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	TBC1D23	Q9NUY8	699 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111	ARL8B	Q9NVJ2	186 aa		13.74	□□□□□ -0.21
TRIM13-208	ENST00000478111		A0A1B0GVI7	797 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111		M0QZ24	198 aa		13.73	□□□□□ -0.21
TRIM13-208	ENST00000478111	ACOT8	O14734	319 aa		13.73	□□□□□ -0.21

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