RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SLC22A11Q9NSA0 550 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 TAS2R4Q9NYW5 299 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 GLTPQ9NZD2 209 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PPP4R1LQ9P1A2 415 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 KLHL13Q9P2N7 655 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 MYOTQ9UBF9 498 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 CTSFQ9UBX1 484 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 C19orf25Q9UFG5 118 aaPredicted RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 KIF25Q9UIL4 384 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 B3GALT5Q9Y2C3 310 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 PCDHGA5Q9Y5G8 931 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 ASCC3Q8N3C0 2202 aaKnown RBP4.38□□□□□ -1.71
SF3B6-202ENST00000478050 CACNA1EQ15878 2313 aa4.38□□□□□ -1.71
SF3B6-202ENST00000478050 FBN3Q75N90 2809 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 CABIN1Q9Y6J0 2220 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 IGHV3-20A0A0C4DH32 117 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 TRBV11-1A0A0K0K1C0 115 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM269A0A1B0GVZ9 245 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 METTL21EPA6NDL7 271 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 DISC1C4P0D8 188 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 MCRIP1C9JLW8 97 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 H3BSH0 61 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 H3BUI4 141 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 DOK2O60496 412 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 RP2O75695 350 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 SCRG1O75711 98 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 B3GALNT1O75752 331 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 ZFAND5O76080 213 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 KDM4BO94953 1096 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 MPC2O95563 127 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 RAB3DO95716 219 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 CRYZL1O95825 349 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 CYB5AP00167 134 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 CD74P04233 296 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 RLN1P04808 185 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 ERCC1P07992 297 aaPredicted RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 HLA-DOBP13765 273 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 PPP3CBP16298 524 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 IL11P20809 199 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 BCKDHBP21953 392 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 NFYAP23511 347 aaPredicted RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 FKBP2P26885 142 aaKnown RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 BDKRB2P30411 391 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 SSTR2P30874 369 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF41P51814 821 aaPredicted RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 EMP2P54851 167 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 FBXW4P57775 412 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 ARPC4P59998 168 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 GMFBP60983 142 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 SEC61A1P61619 476 aaKnown RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 DCDP81605 110 aaKnown RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 POU3F1Q03052 451 aaPredicted RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 PMPCAQ10713 525 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 FOXF1Q12946 379 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 EIF3IQ13347 325 aaKnown RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 MEF2DQ14814 521 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF239Q16600 458 aaKnown RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 NKAIN1Q4KMZ8 207 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 GLYATL3Q5SZD4 288 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 THEM4Q5T1C6 240 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 OR5M10Q6IEU7 315 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 LPCAT3Q6P1A2 487 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 C3P1Q6ZMU1 363 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF627Q7L945 461 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 MDGA2Q7Z553 956 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 CPEB2Q7Z5Q1 589 aaKnown RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 COMMD7Q86VX2 200 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 LINC00346Q8IVM7 164 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 UEVLDQ8IX04 471 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 JAGN1Q8N5M9 183 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 APCDD1LQ8NCL9 501 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 NOXO1Q8NFA2 376 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 OR51S1Q8NGJ8 323 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 PPP1R35Q8TAP8 253 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A43Q8WUT9 341 aaPredicted RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 TNFAIP8L1Q8WVP5 186 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 C11orf40Q8WZ69 217 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 FAM46BQ96A09 425 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 SLAMF6Q96DU3 332 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 SEH1LQ96EE3 360 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 NUDT16L1Q9BRJ7 211 aaKnown RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 UQCC2Q9BRT2 126 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 ARRDC1-AS1Q9H2J1 176 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 C1orf198Q9H425 327 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 SMOC1Q9H4F8 434 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 EXO5Q9H790 373 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 CA10Q9NS85 328 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 MED9Q9NWA0 146 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 KLRF1Q9NZS2 232 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 MED11Q9P086 117 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 ASH2LQ9UBL3 628 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 TUBD1Q9UJT1 453 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 RARRES3Q9UL19 164 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 RAB22AQ9UL26 194 aa4.37□□□□□ -1.71
SF3B6-202ENST00000478050 RPH3AQ9Y2J0 694 aaPredicted RBP4.37□□□□□ -1.71
SF3B6-202ENST00000478050 NCOA6Q14686 2063 aaPredicted RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM200CA6NKL6 621 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF736B4DX44 427 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms