RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PPA1Q15181 289 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 ZMYND11Q15326 602 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 TATDN3Q17R31 274 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 DEFB109BQ30KR1 87 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 FBXW9Q5XUX1 488 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 P4HA3Q7Z4N8 544 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 SKA3Q8IX90 412 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 TUSC5Q8IXB3 177 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 FTMTQ8N4E7 242 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 STEAP2Q8NFT2 490 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 OR51A2Q8NGJ7 313 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 OR13C9Q8NGT0 318 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 OR52I2Q8NH67 350 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 SSC4DQ8WTU2 575 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 SPSB4Q96A44 273 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 MED30Q96HR3 178 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 BOD1Q96IK1 185 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 FAM71F1Q96KD3 344 aaPredicted RBP6.94□□□□□ -1.3
VMA21-203ENST00000477649 C1QTNF5Q9BXJ0 243 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 WNT5BQ9H1J7 359 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 DEFB127Q9H1M4 99 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 AUNIPQ9H7T9 357 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 CNTD2Q9H8S5 307 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 CALHM2Q9HA72 323 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 SLC7A10Q9NS82 523 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 ZNF221Q9UK13 617 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 MRPS28Q9Y2Q9 187 aaKnown RBP6.94□□□□□ -1.3
VMA21-203ENST00000477649 RHBDD3Q9Y3P4 386 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 EML6Q6ZMW3 1958 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 TRAV18A0A075B6X5 111 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 C7orf66A4D0T2 115 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 TMEM14DPA8MWL7 114 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 PRSS44E7EML9 344 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 H3BUI4 141 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 LANCL1O43813 399 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 CA11O75493 328 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 CRYABP02511 175 aaKnown RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 LCATP04180 440 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 CRHP06850 196 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 HOXD4P09016 255 aaPredicted RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 GSTP1P09211 210 aaKnown RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 AKAIN1P0CW23 69 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 SLC2A1P11166 492 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 PSMB1P20618 241 aaKnown RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 TUBG1P23258 451 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 AGTR1P30556 359 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 RCVRNP35243 200 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 CBX5P45973 191 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 ARF1P84077 181 aaKnown RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 PMPCAQ10713 525 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 MALLQ13021 153 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 MEF2DQ14814 521 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 PNLIPRP3Q17RR3 467 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 RSPO1Q2MKA7 263 aaPredicted RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 CLVS2Q5SYC1 327 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 TMEM42Q69YG0 159 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 AWAT2Q6E213 333 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 ZNF774Q6NX45 483 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 COLCA1Q6ZS62 124 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 LHFPL2Q6ZUX7 228 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 ANGPTL5Q86XS5 388 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 OR5AS1Q8N127 324 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 TMEM229BQ8NBD8 167 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 C1orf162Q8NEQ5 155 aaPredicted RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 OR52N4Q8NGI2 321 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 OR56B1Q8NGI3 324 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 GPX8Q8TED1 209 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 PIGTQ969N2 578 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 APOBEC3DQ96AK3 386 aaPredicted RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 SGK3Q96BR1 496 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 MRPS24Q96EL2 167 aaKnown RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 REEP6Q96HR9 211 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 GPER1Q99527 375 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 S100A13Q99584 98 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 MMP28Q9H239 520 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 HRASLSQ9HDD0 168 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.93□□□□□ -1.3
VMA21-203ENST00000477649 TUBG2Q9NRH3 451 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 ING3Q9NXR8 418 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 ZNF319Q9P2F9 582 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 SPRR3Q9UBC9 169 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 CGGBP1Q9UFW8 167 aaPredicted RBP6.93□□□□□ -1.3
VMA21-203ENST00000477649 DOCK10Q96BY6 2186 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 CACNA1AO00555 2505 aa6.93□□□□□ -1.3
VMA21-203ENST00000477649 RIF1Q5UIP0 2472 aaKnown RBP6.92□□□□□ -1.3
VMA21-203ENST00000477649 ALPK2Q86TB3 2170 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 PTPRZ1P23471 2315 aaPredicted RBP6.92□□□□□ -1.3
VMA21-203ENST00000477649 A6NIN4 97 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 EFSO43281 561 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 TPD52L2O43399 206 aaKnown RBP6.92□□□□□ -1.3
VMA21-203ENST00000477649 SSX4O60224 188 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 PEX14O75381 377 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 ADRB1P08588 477 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 H2AFB2P0C5Z0 115 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 NAT2P11245 290 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 ABOP16442 354 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 MPZP25189 248 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 GIFP27352 417 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 BTCP35070 178 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms