RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PLSCR5A0PG75 271 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 MT-ND2P03891 347 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 HLA-DPB1P04440 258 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 GZMKP49863 264 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ACTA2P62736 377 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ACTG2P63267 376 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 MRPS11P82912 194 aaKnown RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 EIF2B1Q14232 305 aaKnown RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 GALEQ14376 348 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 GK2Q14410 553 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 PCGF3Q3KNV8 242 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 KCTD18Q6PI47 426 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ARL9Q6T311 187 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 FBXW12Q6X9E4 464 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 LHFPL3Q86UP9 236 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 EGFL6Q8IUX8 553 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ITLN1Q8WWA0 313 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 APOBEC3DQ96AK3 386 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 SLAMF6Q96DU3 332 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ELMOD3Q96FG2 381 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 DDX28Q9NUL7 540 aaKnown RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 KLHDC2Q9Y2U9 406 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 WIPI2Q9Y4P8 454 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 H3BSA7 217 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 M0R135 149 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 MYL12BO14950 172 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 LMX1BO60663 402 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 LCATP04180 440 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ADH4P08319 380 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 HTR1AP08908 422 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ETV1P50549 477 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 PRKXP51817 358 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 CDH15P55291 814 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 TNFAIP6P98066 277 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 EGR3Q06889 387 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 TMPRSS11AQ6ZMR5 421 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 RHOUQ7L0Q8 258 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 KCTD20Q7Z5Y7 419 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 KLHL36Q8N4N3 616 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 DVL3Q92997 716 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF799Q96GE5 643 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 DCLRE1CQ96SD1 692 aaKnown RBP14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ABHD6Q9BV23 337 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 ALG8Q9BVK2 526 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 MND1Q9BWT6 205 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 CENPMQ9NSP4 180 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 COPS3Q9UNS2 423 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 N6AMT1Q9Y5N5 214 aa14.92□□□□□ -0.02
PTPN7-209ENST00000477554 CD55P08174 381 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 LIMS3P0CW19 117 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 LIMS4P0CW20 117 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 RAC2P15153 192 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 OTX1P32242 354 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-209ENST00000477554 TMEM33P57088 247 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 SRSF2Q01130 221 aaKnown RBP14.91□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF85Q03923 595 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF92Q03936 586 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 IRF3Q14653 427 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 TBCEQ15813 527 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-209ENST00000477554 KRTAP21-3Q3LHN1 58 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 FAM209AQ5JX71 171 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF322Q6U7Q0 402 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-209ENST00000477554 UNQ6126/PRO20091Q6UXV3 157 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 PLEKHG7Q6ZR37 379 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 SPARTQ8N0X7 666 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 C1orf159Q96HA4 380 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 VCX3AQ9NNX9 186 aa14.91□□□□□ -0.02
PTPN7-209ENST00000477554 CAB39Q9Y376 341 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-209ENST00000477554 F5H5P2 479 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF205O95201 554 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 RGS6P49758 472 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 MOGQ16653 247 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 CDONQ4KMG0 1287 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 GLYATL3Q5SZD4 288 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 FAM120AOSQ5T036 256 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 FAM166AQ6J272 317 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 DEGS2Q6QHC5 323 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 C1orf174Q8IYL3 243 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 SYS1Q8N2H4 156 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 NANOGP1Q8N7R0 232 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 OR52N1Q8NH53 320 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF420Q8TAQ5 688 aaPredicted RBP14.9□□□□□ -0.02
PTPN7-209ENST00000477554 RNF133Q8WVZ7 376 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 OR2V2Q96R30 315 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 MDFIQ99750 246 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF649Q9BS31 505 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 MROQ9BYG7 248 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 MRPS26Q9BYN8 205 aaKnown RBP14.9□□□□□ -0.02
PTPN7-209ENST00000477554 PPP1R3EQ9H7J1 279 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 ZNF319Q9P2F9 582 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 CLEC2DQ9UHP7 191 aa14.9□□□□□ -0.02
PTPN7-209ENST00000477554 TRIM64CA6NLI5 447 aa14.89□□□□□ -0.03
PTPN7-209ENST00000477554 PRR32B1ATL7 298 aa14.89□□□□□ -0.03
PTPN7-209ENST00000477554 ZNF878C9JN71 531 aa14.89□□□□□ -0.03
PTPN7-209ENST00000477554 ZNF254O75437 659 aa14.89□□□□□ -0.03
PTPN7-209ENST00000477554 SULT1C4O75897 302 aa14.89□□□□□ -0.03
PTPN7-209ENST00000477554 MT-ND5P03915 603 aa14.89□□□□□ -0.03
PTPN7-209ENST00000477554 KRT8P05787 483 aa14.89□□□□□ -0.03
PTPN7-209ENST00000477554 ATP6V1B1P15313 513 aa14.89□□□□□ -0.03
PTPN7-209ENST00000477554 PMELP40967 661 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms