RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 MARC2Q969Z3 335 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 TMEM265A0A087WTH1 108 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 HSPB6O14558 160 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 HLA-DQB1P01920 261 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
HDAC6-220ENST00000477528 MPPED2Q15777 294 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 OR51A4Q8NGJ6 313 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 CPNE4Q96A23 557 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-220ENST00000477528 PIGMQ9H3S5 423 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 KCNJ16Q9NPI9 418 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 KLF13Q9Y2Y9 288 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-220ENST00000477528 CXCL3P19876 107 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 TMEM128Q5BJH2 165 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 ALKBH3Q96Q83 286 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-220ENST00000477528 OCIAD1Q9NX40 245 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 EDARQ9UNE0 448 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 IGHV5-10-1A0A0J9YXX1 117 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 PI3P19957 117 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 RAC1P63000 192 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 RAB35Q15286 201 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 DRAM2Q6UX65 266 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 C17orf107Q6ZR85 190 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 SLC26A10Q8NG04 563 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 OR1F12Q8NHA8 337 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 MAFIPQ8WZ33 124 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 ADIPOR1Q96A54 375 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 CMBLQ96DG6 245 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 TAAR9Q96RI9 348 aa13.04□□□□□ -0.32
HDAC6-220ENST00000477528 KIR2DS1A0A191URI9 304 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 PNLIPP16233 465 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 HIST1H1DP16402 221 aaKnown RBP13.03□□□□□ -0.32
HDAC6-220ENST00000477528 ZNF14P17017 642 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-220ENST00000477528 KIR2DS4P43632 304 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 KIR2DS1Q14954 304 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 CEACAM16Q2WEN9 425 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 SPSB1Q96BD6 273 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 FOXB1Q99853 325 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 KCNK15Q9H427 330 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 IGKV1D-42A0A075B6H8 117 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 LINC01387J3KSC0 135 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 DHRS3O75911 302 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 KISS1Q15726 138 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 CLPPQ16740 277 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-220ENST00000477528 SLC22A25Q6T423 547 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 GALNT16Q8N428 558 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 OR11H7Q8NGC8 314 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 RNF133Q8WVZ7 376 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 ZNF416Q9BWM5 594 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 CRLF2Q9HC73 371 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 FBXO4Q9UKT5 387 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 D6RAR5 112 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 DCTN6O00399 190 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 INSM1Q01101 510 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-220ENST00000477528 DHRS2Q13268 280 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 OR9K2Q8NGE7 335 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 SEH1LQ96EE3 360 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 CHRNA10Q9GZZ6 450 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 TRAPPC2LQ9UL33 140 aa13.03□□□□□ -0.32
HDAC6-220ENST00000477528 MTCL1Q9Y4B5 1905 aaKnown RBP13.03□□□□□ -0.32
HDAC6-220ENST00000477528 A0A1W2PR77 199 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 OR5H8P0DN80 308 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 NME2P22392 152 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 ARR3P36575 388 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 ZP4Q12836 540 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 DMRTC1Q5HYR2 192 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 TFAP2EQ6VUC0 442 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 DPPA2Q7Z7J5 298 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 C9orf62Q8N4C0 152 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 C12orf49Q9H741 205 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 HPXP02790 462 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 HLA-DOBP13765 273 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 OPRM1P35372 400 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 KIR3DL2P43630 455 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 SELENOPP49908 381 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 MMP16P51512 607 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 AKR7LQ8NHP1 331 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 FLVCR1-AS1Q8TAF5 88 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 M1APQ8TC57 530 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 ARRDC1-AS1Q9H2J1 176 aa13.02□□□□□ -0.32
HDAC6-220ENST00000477528 TRBV5-5A0A0J9YX44 114 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 IGLV3-19P01714 112 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 IL2RGP31785 369 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 CD96P40200 585 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 BAMBIQ13145 260 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 OR2Y1Q8NGV0 311 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 CHAC2Q8WUX2 184 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 ST8SIA2Q92186 375 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 NMNAT2Q9BZQ4 307 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 UNC13CQ8NB66 2214 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 TAAR5O14804 337 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 TBC1D28Q2M2D7 210 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 WIPI1Q5MNZ9 446 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-220ENST00000477528 OR2I1PQ8NGU4 316 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 OR14J1Q9UGF5 321 aa13.02□□□□□ -0.33
HDAC6-220ENST00000477528 PTGFRP43088 359 aa13.01□□□□□ -0.33
HDAC6-220ENST00000477528 RPL19P84098 196 aaKnown RBP13.01□□□□□ -0.33
HDAC6-220ENST00000477528 TOR2AQ5JU69 321 aa13.01□□□□□ -0.33
HDAC6-220ENST00000477528 BHLHE23Q8NDY6 225 aa13.01□□□□□ -0.33
HDAC6-220ENST00000477528 GDF15Q99988 308 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms