RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ADRA2CP18825 462 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 RAB6AP20340 208 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 OR3A4PP47883 348 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 DHRS2Q13268 280 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 ZNF684Q5T5D7 378 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 OR5AS1Q8N127 324 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 HSD17B11Q8NBQ5 300 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 OR4D6Q8NGJ1 314 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 ARL11Q969Q4 196 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 MAP6Q96JE9 813 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 KLHDC3Q9BQ90 382 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 DEFB127Q9H1M4 99 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 SCPEP1Q9HB40 452 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 CDH20Q9HBT6 801 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 ELF5Q9UKW6 265 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 LOXL2Q9Y4K0 774 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 A0A0B4J293 547 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 A0A0D9SG52 128 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 ZNF354AO60765 605 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 WNT11O96014 354 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 TPOP07202 933 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 CD96P40200 585 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 MRPL49Q13405 166 aaKnown RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 LTC4SQ16873 150 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 LINC01590Q5TEZ4 76 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 NAXDQ8IW45 347 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 ZSCAN1Q8NBB4 408 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 SLAMF9Q96A28 289 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 SLC25A38Q96DW6 304 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 ZNF2Q9BSG1 426 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 TMEM231Q9H6L2 316 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 CA10Q9NS85 328 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 ZNF275Q9NSD4 429 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 MEX3AA1L020 520 aaKnown RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 OR2M5A3KFT3 312 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 K7EPK0 472 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 MED6O75586 246 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 SERPINE2P07093 398 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 KLF9Q13886 244 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 FAM71E2Q8N5Q1 922 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 OR51F2Q8NH61 342 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 NINJ1Q92982 152 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 TMPRSS13Q9BYE2 586 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 RTN4RQ9BZR6 473 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 PHF3Q92576 2039 aaKnown RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 IGHV5-10-1A0A0J9YXX1 117 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 TRAPPC2LH3BP13 241 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 UPK3AO75631 287 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 VAMP5O95183 116 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 CCL3P10147 92 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 CCL2P13500 99 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 PRKACBP22694 351 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 PCBD1P61457 104 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 CLINT1Q14677 625 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 SHBQ15464 509 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 RSPO4Q2I0M5 234 aaPredicted RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 SP6Q3SY56 376 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 STX12Q86Y82 276 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 PRSS35Q8N3Z0 413 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 RRNAD1Q96FB5 475 aaKnown RBP9.82□□□□□ -0.84
COL27A1-204ENST00000477421 SCMH1Q96GD3 660 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 PRDM6Q9NQX0 595 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 SH3BGRL2Q9UJC5 107 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 HDGFL3Q9Y3E1 203 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 HEATR5AQ86XA9 2040 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 A0A1W2PP11 408 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 ANKRD30BLA7E2S9 258 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 SNRPGP15A8MWD9 76 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 PHF1O43189 567 aaPredicted RBP9.81□□□□□ -0.84
COL27A1-204ENST00000477421 RBP2P50120 134 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 PPP1R1AQ13522 171 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 Q5BKY6 102 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 C6orf15Q6UXA7 325 aaPredicted RBP9.81□□□□□ -0.84
COL27A1-204ENST00000477421 UBALD1Q8TB05 177 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 RDH5Q92781 318 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 ZC3HAV1LQ96H79 300 aaKnown RBP9.81□□□□□ -0.84
COL27A1-204ENST00000477421 GDF15Q99988 308 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 ZNF175Q9Y473 711 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 C5orf42Q9H799 3197 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 LIPT2A6NK58 231 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 SNAPC5O75971 98 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 PDGFBP01127 241 aaPredicted RBP9.81□□□□□ -0.84
COL27A1-204ENST00000477421 TK1P04183 234 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 ZNF250P15622 560 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 P2RX3P56373 397 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 KISS1Q15726 138 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 LGALSLQ3ZCW2 172 aaPredicted RBP9.81□□□□□ -0.84
COL27A1-204ENST00000477421 SLC25A26Q70HW3 274 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 C9orf62Q8N4C0 152 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 TMEM217Q8N7C4 229 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 SLC38A9Q8NBW4 561 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 PXT1Q8NFP0 134 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 SLC26A10Q8NG04 563 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 RGCCQ9H4X1 137 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 EMC3Q9P0I2 261 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 MRPS18BQ9Y676 258 aaKnown RBP9.81□□□□□ -0.84
COL27A1-204ENST00000477421 PKDREJQ9NTG1 2253 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 C5orf49A4QMS7 147 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 HS3ST1O14792 307 aa9.81□□□□□ -0.84
COL27A1-204ENST00000477421 EFSO43281 561 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms