RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CPEB3Q8NE35 698 aaKnown RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 SLC30A7Q8NEW0 376 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 OR2G2Q8NGZ5 317 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 SHDQ96IW2 340 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 CCDC74BQ96LY2 380 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 CHST5Q9GZS9 411 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 ALX4Q9H161 411 aaPredicted RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 TVP23AA6NH52 213 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 HSPA12AO43301 675 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 SOD3P08294 240 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 FCGR3AP08637 254 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 MAOAP21397 527 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 RPS10P46783 165 aaKnown RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 RBP2P50120 134 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 HTD2P86397 168 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 RAB30Q15771 203 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 USF2Q15853 346 aaPredicted RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 TMEM244Q5VVB8 128 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 C1QL3Q5VWW1 255 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 ANKRD16Q6P6B7 361 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 TIPARPQ7Z3E1 657 aaKnown RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 GPBAR1Q8TDU6 330 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 FOXRED1Q96CU9 486 aaPredicted RBP7.47□□□□□ -1.21
VAPB-205ENST00000476395 SEH1LQ96EE3 360 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 SMIM3Q9BZL3 60 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 FBRSQ9HAH7 460 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 KLK13Q9UKR3 277 aa7.47□□□□□ -1.21
VAPB-205ENST00000476395 F8VVB4 439 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 F8VWA3 439 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 H3BMH7 237 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 C1QL1O75973 258 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 CD5P06127 495 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 ANOS1P23352 680 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 DDTP30046 118 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 RSU1Q15404 277 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.46□□□□□ -1.21
VAPB-205ENST00000476395 C2orf76Q3KRA6 126 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 WDR38Q5JTN6 314 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 TMEM92Q6UXU6 159 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 TAAR8Q969N4 342 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 NEU1Q99519 415 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 GPR27Q9NS67 375 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 RYDENQ9NUL5 291 aaKnown RBP7.46□□□□□ -1.21
VAPB-205ENST00000476395 MRPL22Q9NWU5 206 aaKnown RBP7.46□□□□□ -1.21
VAPB-205ENST00000476395 DOK5Q9P104 306 aa7.46□□□□□ -1.21
VAPB-205ENST00000476395 CGGBP1Q9UFW8 167 aaPredicted RBP7.46□□□□□ -1.21
VAPB-205ENST00000476395 MRPS33Q9Y291 106 aaKnown RBP7.46□□□□□ -1.21
VAPB-205ENST00000476395 ZNF726A6NNF4 738 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 NME2P1O60361 137 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 APODP05090 189 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 SULT1A1P50225 295 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 IL13RA1P78552 427 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 RPL18Q07020 188 aaKnown RBP7.46□□□□□ -1.22
VAPB-205ENST00000476395 MFGE8Q08431 387 aaPredicted RBP7.46□□□□□ -1.22
VAPB-205ENST00000476395 APCDD1LQ8NCL9 501 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 SLC37A2Q8TED4 501 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 C8orf44Q96CB5 159 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 SLC25A36Q96CQ1 311 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 MRGPRX1Q96LB2 322 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 WDR92Q96MX6 357 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 RXFP3Q9NSD7 469 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 CA14Q9ULX7 337 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 TIMM10BQ9Y5J6 103 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 A0A0J9YY10 115 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 LOC101059948A0A1B0GTJ6 334 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 EREGO14944 169 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 CRHP06850 196 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 MELTFP08582 738 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 IGFBP3P17936 291 aaPredicted RBP7.46□□□□□ -1.22
VAPB-205ENST00000476395 ZBTB25P24278 435 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 GLP1RP43220 463 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 TNFRSF4P43489 277 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 CSNK1EP49674 416 aaKnown RBP7.46□□□□□ -1.22
VAPB-205ENST00000476395 MRPS10P82664 201 aaKnown RBP7.46□□□□□ -1.22
VAPB-205ENST00000476395 OR8G1Q15617 311 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 TOMM34Q15785 309 aaPredicted RBP7.46□□□□□ -1.22
VAPB-205ENST00000476395 TEX30Q5JUR7 227 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 MDGA2Q7Z553 956 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 GATSQ8NAP1 163 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 OR5AK2Q8NH90 309 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 MAFIPQ8WZ33 124 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 ETV7Q9Y603 341 aa7.46□□□□□ -1.22
VAPB-205ENST00000476395 SNAPC5O75971 98 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 SFTPBP07988 381 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 ERCC1P07992 297 aaPredicted RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 ZNF84P51523 738 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 NSUN5P2Q63ZY6 315 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 ZNF529Q6P280 563 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 Q6ZRG5 221 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 REC114Q7Z4M0 266 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 DCXRQ7Z4W1 244 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 GPX8Q8TED1 209 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 THOC3Q96J01 351 aaKnown RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 C4orf45Q96LM5 186 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 MESP1Q9BRJ9 268 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 GFOD1Q9NXC2 390 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 TEX13DA0A0J9YY54 714 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms