RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ANKRD30BLA7E2S9 258 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 TRIM77I1YAP6 450 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 M0R129 80 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 CYB5R3P00387 301 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 FSHBP01225 129 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 RBMXP38159 391 aaKnown RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 COMPP49747 757 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 PSMA6P60900 246 aaKnown RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 KPNB1Q14974 876 aaKnown RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 PRAMEF6Q5VXH4 476 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 C12orf73Q69YU5 71 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 LRRN1Q6UXK5 716 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 LRRC28Q86X40 367 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 KLBQ86Z14 1044 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 C10orf67Q8IYJ2 551 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 TCEANCQ8N8B7 351 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 SPERTQ8NA61 448 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 DVL3Q92997 716 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 CNN2Q99439 309 aaKnown RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 RBM4BQ9BQ04 359 aaKnown RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 RIBC2Q9H4K1 309 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 RGCCQ9H4X1 137 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 FN3KRPQ9HA64 309 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 PATZ1Q9HBE1 687 aaKnown RBP13.59□□□□□ -0.23
COL1A1-205ENST00000476387 UFSP2Q9NUQ7 469 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 KLHDC2Q9Y2U9 406 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 LRP12Q9Y561 859 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 TMEM14AQ9Y6G1 99 aa13.59□□□□□ -0.23
COL1A1-205ENST00000476387 SLC22A31A6NKX4 558 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 ADRA2CP18825 462 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 ALOX5APP20292 161 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 CPT2P23786 658 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 ZFP36P26651 326 aaKnown RBP13.58□□□□□ -0.24
COL1A1-205ENST00000476387 EPHA2P29317 976 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 ACTG1P63261 375 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 FAM3AP98173 230 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 MAB21L1Q13394 359 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 SNCBQ16143 134 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 NXNL2Q5VZ03 156 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 MEPCEQ7L2J0 689 aaKnown RBP13.58□□□□□ -0.24
COL1A1-205ENST00000476387 PRSS45Q7RTY3 260 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 GID4Q8IVV7 300 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 FTMTQ8N4E7 242 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 BPIFB2Q8N4F0 458 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 TMEM163Q8TC26 289 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 Q8TCH9 128 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 C14orf119Q9NWQ9 140 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.24
COL1A1-205ENST00000476387 hCG_38984A0A1B0GV85 526 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 A8MXK9 166 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 FAM20BO75063 409 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 RGS9O75916 674 aaPredicted RBP13.57□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF205O95201 554 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 RPS2P15880 293 aaKnown RBP13.57□□□□□ -0.24
COL1A1-205ENST00000476387 FPR2P25090 351 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 GNALP38405 381 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 HCCSP53701 268 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 ESCO2Q56NI9 601 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 PLPP7Q8NBV4 271 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 CSNK2A3Q8NEV1 391 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 OR8S1Q8NH09 359 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 ASB17Q8WXJ9 295 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 SGK3Q96BR1 496 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 SLC6A7Q99884 636 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 GABARAPL3Q9BY60 117 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 MROQ9BYG7 248 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF391Q9UJN7 358 aa13.57□□□□□ -0.24
COL1A1-205ENST00000476387 TMEM89A2RUT3 159 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 A6NLC8 198 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 CEACAM18A8MTB9 384 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 F5H0A9 414 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-205ENST00000476387 CFPP27918 469 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 GSK3AP49840 483 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 MPPED2Q15777 294 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 DEGS2Q6QHC5 323 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 BCDIN3DQ7Z5W3 292 aaKnown RBP13.56□□□□□ -0.24
COL1A1-205ENST00000476387 DEFB108BQ8NET1 73 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-205ENST00000476387 PKP2Q99959 881 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 PAPOLGQ9BWT3 736 aaKnown RBP13.56□□□□□ -0.24
COL1A1-205ENST00000476387 TTTY10Q9BZA0 68 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 RNF7Q9UBF6 113 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 IKZF2Q9UKS7 526 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 LRCH1Q9Y2L9 728 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 PPIAL4AQ9Y536 164 aa13.56□□□□□ -0.24
COL1A1-205ENST00000476387 hCG_1807616A0A1W2PRN6 198 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 PSMD9O00233 223 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 PHYHO14832 338 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF254O75437 659 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 FSTL3O95633 263 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 PTBP3O95758 552 aaKnown RBP13.55□□□□□ -0.24
COL1A1-205ENST00000476387 GRPP07492 148 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF12P17014 697 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 PMELP40967 661 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 RIDAP52758 137 aaKnown RBP13.55□□□□□ -0.24
COL1A1-205ENST00000476387 CDC42P60953 191 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 OR8B8Q15620 311 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms