RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 C1orf94Q6P1W5 598 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 RBM45Q8IUH3 476 aaKnown RBP11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 AQP12AQ8IXF9 295 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 BHLHE23Q8NDY6 225 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 WFDC6Q9BQY6 131 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 CHID1Q9BWS9 393 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 HCAR1Q9BXC0 346 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 TXNIPQ9H3M7 391 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 INPP5EQ9NRR6 644 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 UFSP2Q9NUQ7 469 aa11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 GAR1Q9NY12 217 aaKnown RBP11.75□□□□□ -0.53
CSNK2B-207ENST00000475875 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 A0A1W2PPL8 197 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 CPSF4LA6NMK7 179 aaKnown RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 KPNA4O00629 521 aaPredicted RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 GYPAP02724 150 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 ALDOBP05062 364 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 HOXB6P17509 224 aaKnown RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 ATP6V1B2P21281 511 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 AQP2P41181 271 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 YAP1P46937 504 aaKnown RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 KLRD1Q13241 179 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 NPTX1Q15818 432 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 PRAMEF6Q5VXH4 476 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 FAM90A1Q86YD7 464 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 OR4D11Q8NGI4 311 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 LIPHQ8WWY8 451 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 RSRC1Q96IZ7 334 aaKnown RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 NKX3-1Q99801 234 aaPredicted RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 FNDC11Q9BVV2 318 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 POLR2J2Q9GZM3 115 aaKnown RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 SLC22A4Q9H015 551 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 POLR2J3Q9H1A7 115 aaKnown RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 METTL8Q9H825 291 aaKnown RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 YY1AP1Q9H869 796 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 PALMDQ9NP74 551 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 RIMS3Q9UJD0 308 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 AURKCQ9UQB9 309 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 SF3B6Q9Y3B4 125 aaKnown RBP11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 CSMD3Q7Z407 3707 aa11.74□□□□□ -0.53
CSNK2B-207ENST00000475875 A0A1W2PRX2 142 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 TRAPPC13A5PLN9 417 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 M0R1W7 72 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 THY1P04216 161 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 FABP3P05413 133 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 RHCEP18577 417 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 ST3GAL3Q11203 375 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 PIN1Q13526 163 aaPredicted RBP11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 HABP2Q14520 560 aaPredicted RBP11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 ZDHHC21Q8IVQ6 265 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 PNKDQ8N490 385 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 OR1F12Q8NHA8 337 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 ADAMTS16Q8TE57 1224 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 MCRIP2Q9BUT9 160 aaKnown RBP11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 PRSS22Q9GZN4 317 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 MAGIXQ9H6Y5 334 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 IL1RAPQ9NPH3 570 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 MEPEQ9NQ76 525 aaPredicted RBP11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 ENPP4Q9Y6X5 453 aa11.73□□□□□ -0.53
CSNK2B-207ENST00000475875 RYR1P21817 5038 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 TCRBV5S2A0A599 114 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 DHRS12A0PJE2 317 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 RRP9O43818 475 aaKnown RBP11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 OR7A10O76100 309 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 MT-ND1P03886 318 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 RAP2AP10114 183 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 FUT1P19526 365 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 SMIM11AP58511 58 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 HOXA4Q00056 320 aaPredicted RBP11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 AQP6Q13520 282 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 MEPCEQ7L2J0 689 aaKnown RBP11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 RRM2BQ7LG56 351 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 SLC36A1Q7Z2H8 476 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 FAM86B1Q8N7N1 296 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 BOLLQ8N9W6 283 aaKnown RBP11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 CANT1Q8WVQ1 401 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 SLC7A6Q92536 515 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 RORBQ92753 470 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 UTP4Q969X6 686 aaKnown RBP11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 AJUBAQ96IF1 538 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 C7orf34Q96L11 122 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 NDUFAF4Q9P032 175 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 SLC7A7Q9UM01 511 aa11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 LSM4Q9Y4Z0 139 aaKnown RBP11.72□□□□□ -0.53
CSNK2B-207ENST00000475875 GNGT2O14610 69 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 RAMP3O60896 148 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 OR5F1O95221 314 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 LHBP01229 141 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 SCG5P05408 212 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 RPL27P61353 136 aaKnown RBP11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 DGCR2P98153 550 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 PRB3Q04118 309 aaPredicted RBP11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 TRAM2Q15035 370 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 CNN3Q15417 329 aaKnown RBP11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 UNQ9370/PRO34162Q6UXP9 181 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 GCSAMQ8N6F7 178 aa11.71□□□□□ -0.53
CSNK2B-207ENST00000475875 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms