RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 KRT74Q7RTS7 529 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.94□□□□□ -1.46
LIMD1-204ENST00000474665 C1orf174Q8IYL3 243 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 ELMOD2Q8IZ81 293 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 RDH10Q8IZV5 341 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 OR5AS1Q8N127 324 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 SYS1Q8N2H4 156 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 YIPF7Q8N8F6 280 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 PLPP7Q8NBV4 271 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 OR56B2PQ8NGI1 322 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 OR52H1Q8NGJ2 320 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 OR2G2Q8NGZ5 317 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 OR10AC1Q8NH08 325 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 RPS4Y2Q8TD47 263 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 SNX33Q8WV41 574 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 TMEM80Q96HE8 168 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 REEP6Q96HR9 211 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 GSX2Q9BZM3 304 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 FGF23Q9GZV9 251 aaPredicted RBP5.94□□□□□ -1.46
LIMD1-204ENST00000474665 PBOV1Q9GZY1 135 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 RASSF4Q9H2L5 321 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 MSL2Q9HCI7 577 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 TUBG2Q9NRH3 451 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 INPP5EQ9NRR6 644 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 FAIMQ9NVQ4 179 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 FRRS1LQ9P0K9 344 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 ERVK-18Q9QC07 812 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 GNG8Q9UK08 70 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 OR52A1Q9UKL2 312 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 LSM2Q9Y333 95 aaKnown RBP5.94□□□□□ -1.46
LIMD1-204ENST00000474665 PCDHGB1Q9Y5G3 927 aa5.94□□□□□ -1.46
LIMD1-204ENST00000474665 ANK3Q12955 4377 aaKnown RBP5.94□□□□□ -1.46
LIMD1-204ENST00000474665 NBEAL2Q6ZNJ1 2754 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 SVEP1Q4LDE5 3571 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 A0A0U1RQV5 110 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 ACOD1A6NK06 481 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 IQCF6A8MYZ5 107 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 LOC110117498-PIK3R3F6TDL0 507 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 H0YL77 283 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 J3QLW9 94 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 M0R233 179 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 MLNRO43193 412 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 TBX1O43435 398 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 LMX1BO60663 402 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 IGHV1-46P01743 117 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 HPXP02790 462 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 MT-ND2P03891 347 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 ADH4P08319 380 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF19P17023 458 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 CCL1P22362 96 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 GCH1P30793 250 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 MAGEB1P43366 347 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 PTH2RP49190 550 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 PPOXP50336 477 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 KRTAP1-1Q07627 177 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 RNLSQ5VYX0 342 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 PGAP1Q75T13 922 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 KCTD20Q7Z5Y7 419 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 EGFL6Q8IUX8 553 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 NANOGP1Q8N7R0 232 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF540Q8NDQ6 660 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 BHLHE23Q8NDY6 225 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 OR8G5Q8NG78 346 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 OR5L1Q8NGL2 311 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 OR51E1Q8TCB6 317 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 SPRYD4Q8WW59 207 aaPredicted RBP5.93□□□□□ -1.46
LIMD1-204ENST00000474665 RGP1Q92546 391 aaPredicted RBP5.93□□□□□ -1.46
LIMD1-204ENST00000474665 DVL3Q92997 716 aaPredicted RBP5.93□□□□□ -1.46
LIMD1-204ENST00000474665 PIGTQ969N2 578 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 PGAM5Q96HS1 289 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 SLC30A2Q9BRI3 323 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 CDCA4Q9BXL8 241 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 OR10A2Q9H208 303 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 TPK1Q9H3S4 243 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 GPR84Q9NQS5 396 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 BEX4Q9NWD9 120 aaPredicted RBP5.93□□□□□ -1.46
LIMD1-204ENST00000474665 CAB39Q9Y376 341 aaPredicted RBP5.93□□□□□ -1.46
LIMD1-204ENST00000474665 RHBDD3Q9Y3P4 386 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 SNX5Q9Y5X3 404 aa5.93□□□□□ -1.46
LIMD1-204ENST00000474665 A0A1W2PPW3 197 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 C17orf100A8MU93 164 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 LYNX1G3V0Z9 82 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 H3BSH0 61 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 P2RY10O00398 339 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 OGG1O15527 345 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 XRCC2O43543 280 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 TIMM8AO60220 97 aaPredicted RBP5.92□□□□□ -1.46
LIMD1-204ENST00000474665 ZFPL1O95159 310 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 APOC1P02654 83 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 HLA-DPB1P04440 258 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 LYNX1P0DP58 116 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 SELEP16581 610 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 PMELP40967 661 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 MAP2K4P45985 399 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 TGM4P49221 684 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 CCR9P51686 369 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 CDH15P55291 814 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 ATP5J2P56134 94 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 SNRPD2P62316 118 aaKnown RBP5.92□□□□□ -1.46
LIMD1-204ENST00000474665 ACTA2P62736 377 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms