RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CLVS2Q5SYC1 327 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 SPATA46Q5T0L3 261 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 FAM27D1Q5T7N8 215 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 ZBTB37Q5TC79 503 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 PLCXD3Q63HM9 321 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 UNQ9370/PRO34162Q6UXP9 181 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 RFPL4BQ6ZWI9 263 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 PRSS45Q7RTY3 260 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 JAGN1Q8N5M9 183 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 OR1M1Q8NGA1 313 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 OR13C9Q8NGT0 318 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 RNF166Q96A37 237 aaPredicted RBP8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 SGK3Q96BR1 496 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 FOXRED1Q96CU9 486 aaPredicted RBP8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 TRMT61AQ96FX7 289 aaKnown RBP8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 TSC22D3Q99576 134 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 ABCB9Q9NP78 766 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 TMEM138Q9NPI0 162 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 NKIRAS2Q9NYR9 191 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 TAS2R4Q9NYW5 299 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 GPR160Q9UJ42 338 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 STARD10Q9Y365 291 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 ATP23Q9Y6H3 246 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 V9GY05 133 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 V9GYS6 101 aa8.88□□□□□ -0.99
PRPF38A-202ENST00000474048 ITPR1Q14643 2758 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 TRBV5-7A0A0A0MS05 114 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 A0A1B0GTI1 187 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 hCG_38984A0A1B0GV85 526 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 PLSCR5A0PG75 271 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 SMIM30A4D0T7 59 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 NOTOA8MTQ0 251 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 ABCD4O14678 606 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 TMEM127O75204 238 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 NRASP01111 189 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 CD3EP07766 207 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 RAC2P15153 192 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 PRKACBP22694 351 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 RPS19P39019 145 aaKnown RBP8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 WNT5AP41221 380 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 CAPZA1P52907 286 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 SPOCK1Q08629 439 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 MZT1Q08AG7 82 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 GK2Q14410 553 aaPredicted RBP8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 MOGQ16653 247 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF404Q494X3 552 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 BEX5Q5H9J7 111 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 IDNKQ5T6J7 187 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 DDI2Q5TDH0 399 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 VHLLQ6RSH7 139 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 SEZ6L2Q6UXD5 910 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 COLCA1Q6ZS62 124 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 ZDHHC23Q8IYP9 409 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF101Q8IZC7 436 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 PAQR4Q8N4S7 273 aaPredicted RBP8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 PARP16Q8N5Y8 322 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 BHLHE23Q8NDY6 225 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 OR56B2PQ8NGI1 322 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 OR14K1Q8NGZ2 314 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 OR8S1Q8NH09 359 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 SLC25A40Q8TBP6 338 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 DYNC2LI1Q8TCX1 351 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 ACOT12Q8WYK0 555 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 PIGCQ92535 297 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 SPSB4Q96A44 273 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 SLC25A46Q96AG3 418 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 BORCS8Q96FH0 119 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 LYZL4Q96KX0 146 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF75AQ96N20 296 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 WFIKKN1Q96NZ8 548 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 SORCS2Q96PQ0 1159 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 MRI1Q9BV20 369 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 OR2J1Q9GZK6 312 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 DAPK2Q9UIK4 370 aa8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 AK6Q9Y3D8 172 aaKnown RBP8.87□□□□□ -0.99
PRPF38A-202ENST00000474048 A6NIN4 97 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 ATP6V1G2-DDX39BF2Z307 99 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 ICMTO60725 284 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 CYB5AP00167 134 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 NGFP01138 241 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF35P13682 527 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 MAGEB1P43366 347 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 KIR2DL3P43628 341 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 KLF3P57682 345 aaPredicted RBP8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 FAM3AP98173 230 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 BSPH1Q075Z2 132 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 HLXQ14774 488 aaPredicted RBP8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 OR8B8Q15620 311 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 RAB11BQ15907 218 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 SFXN4Q6P4A7 337 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 FBXW12Q6X9E4 464 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 MOB3CQ70IA8 216 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 UTS2BQ765I0 119 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 MYPOPQ86VE0 399 aaPredicted RBP8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 PLPP7Q8NBV4 271 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 SYNPRQ8TBG9 265 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 NPRL2Q8WTW4 380 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 ITLN2Q8WWU7 325 aaPredicted RBP8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 PHF21AQ96BD5 680 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 SPSB1Q96BD6 273 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms