RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CAMK2DQ13557 499 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 MPPED2Q15777 294 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 SGCAQ16586 387 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 RNASE10Q5GAN6 216 aaKnown RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 C1orf100Q5SVJ3 147 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 CLVS2Q5SYC1 327 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 PRAMEF20Q5VT98 475 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF626Q68DY1 528 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 AWAT2Q6E213 333 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 C16orf47Q6ZP98 133 aaPredicted RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 DNM1P46Q6ZS02 220 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 TMPRSS9Q7Z410 1059 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ABHD12BQ7Z5M8 362 aaPredicted RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 RPS19BP1Q86WX3 136 aaKnown RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM17Q86X19 198 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 C1orf210Q8IVY1 113 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF101Q8IZC7 436 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 GABRG1Q8N1C3 465 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 C9orf62Q8N4C0 152 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 FTMTQ8N4E7 242 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 SLC38A9Q8NBW4 561 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 GJC3Q8NFK1 279 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 OR11G2Q8NGC1 345 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 OR4C16Q8NGL9 310 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 OR10AC1Q8NH08 325 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 KCNG3Q8TAE7 436 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ATOH1Q92858 354 aaPredicted RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 SNAPC3Q92966 411 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 FGGYQ96C11 551 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF524Q96C55 264 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 PGAM5Q96HS1 289 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM41AQ96HV5 264 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ZC3H10Q96K80 434 aaKnown RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 GPR137Q96N19 417 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 GPER1Q99527 375 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 KLHDC3Q9BQ90 382 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 SF3B5Q9BWJ5 86 aaKnown RBP5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 ANGPTL4Q9BY76 406 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 CHIAQ9BZP6 476 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 CST11Q9H112 138 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 NELFAQ9H3P2 528 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 BEX1Q9HBH7 125 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 APMAPQ9HDC9 416 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 PLSCR3Q9NRY6 295 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 FAM206AQ9NX38 181 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 GLTPQ9NZD2 209 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 COMMD9Q9P000 198 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 GHRLQ9UBU3 117 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 B4GALT7Q9UBV7 327 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 UBQLN2Q9UHD9 624 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 CYB5R1Q9UHQ9 305 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 FBXO4Q9UKT5 387 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 MAB21L2Q9Y586 359 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 SESN1Q9Y6P5 492 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 U3KQA8 63 aa5.19□□□□□ -1.58
ATPAF1-204ENST00000474020 LOC390937A0A1W2PQ73 354 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 CIB4A0PJX0 185 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM200CA6NKL6 621 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 C17orf51A8MQB3 221 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 F5H5P2 479 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 SMLR1H3BR10 107 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 TRAF3IP2O43734 574 aaPredicted RBP5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 GMDSO60547 372 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 SRSF10O75494 262 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 RP2O75695 350 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 HPP00738 406 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 ACSM4P0C7M7 580 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 JMJD7P0C870 316 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF883P0CG24 379 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 COX6A1P12074 109 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 ANXA7P20073 488 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 SRD5A2P31213 254 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 THBS4P35443 961 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF93P35789 620 aaPredicted RBP5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 PTGDSP41222 190 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 RAD52P43351 418 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 SLC6A9P48067 706 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 PER3P56645 1201 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 MLF1P58340 268 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 PCBD1P61457 104 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 SNRPD2P62316 118 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 ZFP36L1Q07352 338 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 SIGLEC14Q08ET2 396 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 FOXL1Q12952 345 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 LINC00303Q3SY05 128 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 CDNFQ49AH0 187 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 THOC7Q6I9Y2 204 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 FAM166AQ6J272 317 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 SLC25A47Q6Q0C1 308 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 CORO6Q6QEF8 472 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 IDO2Q6ZQW0 420 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 Q6ZTK2 550 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 TRAPPC6BQ86SZ2 158 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 MAML2Q8IZL2 1156 aaPredicted RBP5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 OR8H3Q8N146 312 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 BPIFB2Q8N4F0 458 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 UXS1Q8NBZ7 420 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 STEAP2Q8NFT2 490 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 BEST4Q8NFU0 473 aa5.18□□□□□ -1.58
ATPAF1-204ENST00000474020 OR56B1Q8NGI3 324 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms