RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CX3CR1P49238 355 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 BLVRAP53004 296 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 PPP1R8Q12972 351 aaKnown RBP16.38■□□□□ 0.21
COL9A3-210ENST00000472880 EIF2B1Q14232 305 aaKnown RBP16.38■□□□□ 0.21
COL9A3-210ENST00000472880 TIGD6Q17RP2 521 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 TEX30Q5JUR7 227 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 TREML4Q6UXN2 200 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 Q6YL49 198 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 FAM90A1Q86YD7 464 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 GCSAMQ8N6F7 178 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 OR4Q3Q8NH05 313 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 SPSB4Q96A44 273 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 FAM71F1Q96KD3 344 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-210ENST00000472880 WDFY2Q96P53 400 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 TBX15Q96SF7 602 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 NMNAT2Q9BZQ4 307 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 C1orf21Q9H246 121 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 MUC13Q9H3R2 512 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 REEP1Q9H902 201 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 TAS2R1Q9NYW7 299 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 SAMHD1Q9Y3Z3 626 aaKnown RBP16.38■□□□□ 0.21
COL9A3-210ENST00000472880 MMP24Q9Y5R2 645 aa16.38■□□□□ 0.21
COL9A3-210ENST00000472880 A0A1B0GUS0 222 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 DHRS12A0PJE2 317 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 KNG1P01042 644 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 CLUP10909 449 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 MMP9P14780 707 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 ZNF3P17036 446 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 GRK5P34947 590 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 PDCD1Q15116 288 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 FIP1L1Q6UN15 594 aaKnown RBP16.37■□□□□ 0.21
COL9A3-210ENST00000472880 SLC16A9Q7RTY1 509 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 TMEM86BQ8N661 226 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 OR4F5Q8NH21 305 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 RASSF4Q9H2L5 321 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 TOR3AQ9H497 397 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 MAGIXQ9H6Y5 334 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 SP140LQ9H930 580 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 U3KQV3 271 aa16.37■□□□□ 0.21
COL9A3-210ENST00000472880 IGHV3OR15-7A0A075B7D8 119 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 CENPVL3A0A0U1RRI6 287 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 TCRBV5S2A0A599 114 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 DVL1O14640 695 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 TNFRSF13BO14836 293 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-210ENST00000472880 KCNAB3O43448 404 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 MELTFP08582 738 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 RAG2P55895 527 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 TRIM25Q14258 630 aaKnown RBP16.36■□□□□ 0.21
COL9A3-210ENST00000472880 MICAQ29983 383 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 TEX36Q5VZQ5 186 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 LCN8Q6JVE9 175 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 BTN2A1Q7KYR7 527 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 OR6N2Q8NGY6 317 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 ST8SIA4Q92187 359 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 REEP6Q96HR9 211 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 DGCR6LQ9BY27 220 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 CHIAQ9BZP6 476 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 BEX1Q9HBH7 125 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 ACOXLQ9NUZ1 547 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 POMT1Q9Y6A1 747 aa16.36■□□□□ 0.21
COL9A3-210ENST00000472880 IGHV1-69DA0A0B4J2H0 117 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 ECDO95905 644 aaPredicted RBP16.35■□□□□ 0.21
COL9A3-210ENST00000472880 IGHV1-69P01742 117 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 APOC1P02654 83 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 CFL1P23528 166 aaKnown RBP16.35■□□□□ 0.21
COL9A3-210ENST00000472880 FAM3AP98173 230 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 MS4A2Q01362 244 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 MICBQ29980 383 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 GFOD2Q3B7J2 385 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 C11orf91Q3C1V1 193 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 OR2T5Q6IEZ7 315 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 C17orf107Q6ZR85 190 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 DPY19L4Q7Z388 723 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 DHFR2Q86XF0 187 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 ERI1Q8IV48 349 aaKnown RBP16.35■□□□□ 0.21
COL9A3-210ENST00000472880 OR2T29Q8NH02 315 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 TEX47Q8TBZ9 253 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 LRRC29Q8WV35 223 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 SSMEM1Q8WWF3 244 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 WFDC12Q8WWY7 111 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 LHX4Q969G2 390 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 INTS14Q96SY0 518 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 SIRPDQ9H106 197 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 RNPEPL1Q9HAU8 725 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 CMC2Q9NRP2 79 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 VNN3Q9NY84 501 aa16.35■□□□□ 0.21
COL9A3-210ENST00000472880 TIPRLO75663 272 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 LHBP01229 141 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 GNALP38405 381 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 ARF6P62330 175 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 POU4F2Q12837 409 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 FAM98BQ52LJ0 330 aaKnown RBP16.34■□□□□ 0.21
COL9A3-210ENST00000472880 LINC01590Q5TEZ4 76 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 FAM57BQ71RH2 274 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 SCCPDHQ8NBX0 429 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 OR1M1Q8NGA1 313 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 OR52H1Q8NGJ2 320 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 TBC1D15Q8TC07 691 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 OTULINQ96BN8 352 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 ASB9Q96DX5 294 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms