RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 GLYATQ6IB77 296 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 REEP3Q6NUK4 255 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 FAM159AQ6UWV7 190 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 DGAT2L6Q6ZPD8 337 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 SHISA6Q6ZSJ9 500 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 NANOGNBQ7Z5D8 188 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ANKRD37Q7Z713 158 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 IFNEQ86WN2 208 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 DHFR2Q86XF0 187 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-202ENST00000471307 PRSS58Q8IYP2 241 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 MICU2Q8IYU8 434 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 CLEC4FQ8N1N0 589 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF615Q8N8J6 731 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ZNRF1Q8ND25 227 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 OR52E4Q8NGH9 312 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 OR5AK3PQ8NH89 298 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF721Q8TF20 911 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 CT55Q8WUE5 264 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 HIST1H2ACQ93077 130 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 TSLPQ969D9 159 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 NCLNQ969V3 563 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 SLC35G5Q96KT7 338 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 IP6K3Q96PC2 410 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 MS4A4EQ96PG1 132 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 STACQ99469 402 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 OR51I1Q9H343 314 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 PIGUQ9H490 435 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 IKZF5Q9H5V7 419 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ASCL3Q9NQ33 180 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 YAE1D1Q9NRH1 226 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 MED17Q9NVC6 651 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 EXD2Q9NVH0 621 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 CALML5Q9NZT1 146 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ERVK-18Q9QC07 812 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 PRODH2Q9UF12 536 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 SLC7A8Q9UHI5 535 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 POMPQ9Y244 141 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 FBXO7Q9Y3I1 522 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 NEUROG3Q9Y4Z2 214 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 NINQ8N4C6 2090 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 SPTBN2O15020 2390 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 TRAV9-2A0A087WT02 112 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 OR5H15A6NDH6 313 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 TRABD2BA6NFA1 517 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 SAGE2PA6NJ88 616 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 A8MUA0 341 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 C5orf58C9J3I9 102 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 H0Y9J4 135 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 CXCR6O00574 342 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 SYT7O43581 403 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 SERPINB7O75635 380 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 PDE5AO76074 875 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 GIG44P09565 113 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 TFPTP0C1Z6 253 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 OR12D1P0DN82 309 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 ETS2P15036 469 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 GGT1P19440 569 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 DRD5P21918 477 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 DPP4P27487 766 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 HTR2AP28223 471 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 LCN1P31025 176 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 KDELR2P33947 212 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 GABRA3P34903 492 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 DLSTP36957 453 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 FHITP49789 147 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 TNFSF10P50591 281 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 EFNA3P52797 238 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 CRISP3P54108 245 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 ACTR3P61158 418 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 ELF3P78545 371 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 FLOT2Q14254 428 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 EXOSC7Q15024 291 aaKnown RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 TATDN3Q17R31 274 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 ARHGAP11BQ3KRB8 267 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 SLC22A6Q4U2R8 563 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 DDI2Q5TDH0 399 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 LCN8Q6JVE9 175 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 TNFAIP8L2Q6P589 184 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 HSDL2Q6YN16 418 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 LRRC74BQ6ZQY2 392 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 LANCL3Q6ZV70 420 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 CCDC80Q76M96 950 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 NDUFAF7Q7L592 441 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 ZDHHC21Q8IVQ6 265 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 CHDHQ8NE62 594 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 NFAM1Q8NET5 270 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 B3GNT7Q8NFL0 401 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 OR52R1Q8NGF1 315 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 OR5L2Q8NGL0 311 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 OR8K3Q8NH51 312 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 M1APQ8TC57 530 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 PNPT1Q8TCS8 783 aaKnown RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 GPR151Q8TDV0 419 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 RASSF5Q8WWW0 418 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 RAB8BQ92930 207 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 KIAA1143Q96AT1 154 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 CCDC124Q96CT7 223 aaKnown RBP3.92□□□□□ -1.78
CCDC39-202ENST00000471307 FAM122AQ96E09 287 aa3.92□□□□□ -1.78
CCDC39-202ENST00000471307 C16orf58Q96GQ5 468 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms