RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TP53I3Q53FA7 332 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 BCL2L15Q5TBC7 163 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 PPP1R14AQ96A00 147 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 SIGLEC11Q96RL6 698 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 SLC22A4Q9H015 551 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 DCAF16Q9NXF7 216 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 ZNF391Q9UJN7 358 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 RPL36Q9Y3U8 105 aaKnown RBP16.71■□□□□ 0.27
HDAC7-220ENST00000471235 PCDHGB1Q9Y5G3 927 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.71■□□□□ 0.272e-12■■■■■ 46.8
HDAC7-220ENST00000471235 MALRD1Q5VYJ5 2156 aa16.71■□□□□ 0.27
HDAC7-220ENST00000471235 CLDN25C9JDP6 229 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 PPIHO43447 177 aaKnown RBP16.7■□□□□ 0.26
HDAC7-220ENST00000471235 ATP6V1G2O95670 118 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 IGLV3-1P01715 115 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 IGHA1P01876 353 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 TACSTD2P09758 323 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 ACKR3P25106 362 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 RBMXP38159 391 aaKnown RBP16.7■□□□□ 0.26
HDAC7-220ENST00000471235 CD200P41217 278 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 SRP9P49458 86 aaKnown RBP16.7■□□□□ 0.26
HDAC7-220ENST00000471235 RAB40BQ12829 278 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 CDONQ4KMG0 1287 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 LIPNQ5VXI9 398 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 FAM220AQ7Z4H9 259 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 C8orf59Q8N0T1 100 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-220ENST00000471235 ACBD7Q8N6N7 88 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 OR52I1Q8NGK6 324 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 ACOXLQ9NUZ1 547 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 MRPS18AQ9NVS2 196 aaKnown RBP16.7■□□□□ 0.26
HDAC7-220ENST00000471235 GNG8Q9UK08 70 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 OR52A1Q9UKL2 312 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 MYRFQ9Y2G1 1151 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 NOP16Q9Y3C1 178 aaKnown RBP16.7■□□□□ 0.26
HDAC7-220ENST00000471235 SNX5Q9Y5X3 404 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 HSPE1-MOB4S4R3N1 261 aa16.7■□□□□ 0.26
HDAC7-220ENST00000471235 IGHV3-64DA0A0J9YX35 117 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 ANKRD30BLA7E2S9 258 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 GMDSO60547 372 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 LY6G6DO95868 133 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 TMEM33P57088 247 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 RIPK1Q13546 671 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 TMEM249Q2WGJ8 235 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 AVPI1Q5T686 147 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 COMMD2Q86X83 199 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 CATSPERDQ86XM0 798 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 CSNK2A3Q8NEV1 391 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 OR51E1Q8TCB6 317 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 CCL17Q92583 94 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 RORBQ92753 470 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 TFAP2CQ92754 450 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 GPR84Q9NQS5 396 aa16.69■□□□□ 0.26
HDAC7-220ENST00000471235 TLN2Q9Y4G6 2542 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 LRP5LA4QPB2 252 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 H0YJX3 145 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 FAM20BO75063 409 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 FADS2O95864 444 aaKnown RBP16.68■□□□□ 0.26
HDAC7-220ENST00000471235 CHN2P52757 468 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 MAB21L1Q13394 359 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 C6orf52Q5T4I8 152 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 CLEC9AQ6UXN8 241 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 ELMOD2Q8IZ81 293 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 CELF2-AS1Q8N7Q2 184 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 FBLIM1Q8WUP2 373 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 RNF166Q96A37 237 aaPredicted RBP16.68■□□□□ 0.26
HDAC7-220ENST00000471235 FAM71F1Q96KD3 344 aaPredicted RBP16.68■□□□□ 0.26
HDAC7-220ENST00000471235 ALG8Q9BVK2 526 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 NARFLQ9H6Q4 476 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 PPP1R3EQ9H7J1 279 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 GCM1Q9NP62 436 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 TMEM106BQ9NUM4 274 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 PPP1R3CQ9UQK1 317 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 SLC22A13Q9Y226 551 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 RHBDD3Q9Y3P4 386 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 WIPI2Q9Y4P8 454 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 CSPG4Q6UVK1 2322 aa16.68■□□□□ 0.26
HDAC7-220ENST00000471235 WNT9BO14905 357 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 HEXAP06865 529 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 PSMB10P40306 273 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 OR12D2P58182 307 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 ACTA2P62736 377 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 ACTG2P63267 376 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 MVKQ03426 396 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 SLC3A1Q07837 685 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 GALEQ14376 348 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 SNCBQ16143 134 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 KLHL22Q53GT1 634 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 PRAMEF6Q5VXH4 476 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 LAIR2Q6ISS4 152 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 LHFPL3Q86UP9 236 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 MOGAT3Q86VF5 341 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 KLBQ86Z14 1044 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 ZNF420Q8TAQ5 688 aaPredicted RBP16.67■□□□□ 0.26
HDAC7-220ENST00000471235 C4orf36Q96KX1 117 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 ZNF649Q9BS31 505 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 PAPOLGQ9BWT3 736 aaKnown RBP16.67■□□□□ 0.26
HDAC7-220ENST00000471235 VCX3BQ9H321 246 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 FGF20Q9NP95 211 aaPredicted RBP16.67■□□□□ 0.26
HDAC7-220ENST00000471235 INPP5EQ9NRR6 644 aa16.67■□□□□ 0.26
HDAC7-220ENST00000471235 ERVK13-1Q9NX77 482 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms