RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TNFSF11O14788 317 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ADAM20O43506 726 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 CTNSO60931 367 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 RAF1P04049 648 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 HTR1FP30939 366 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ADRA1AP35348 466 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 PIGPP57054 158 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 OR1C1Q15619 314 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 VWA2Q5GFL6 755 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 SLC16A12Q6ZSM3 486 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 H1FNTQ75WM6 255 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 PARS2Q7L3T8 475 aaKnown RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 GDF7Q7Z4P5 450 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 LSMEM1Q8N8F7 131 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF485Q8NCK3 441 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 MYOZ3Q8TDC0 251 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 FLYWCH2Q96CP2 140 aaKnown RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF778Q96MU6 729 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 INSM2Q96T92 566 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 HCFC1R1Q9NWW0 138 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF391Q9UJN7 358 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 MMP17Q9ULZ9 603 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 FZR1Q9UM11 496 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 A0A1B0GWA3 101 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 POM121BA6NF01 834 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 M0R135 149 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 AP4M1O00189 453 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ST8SIA5O15466 376 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ORM2P19652 201 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 OR3A4PP47883 348 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 PJVKQ0ZLH3 352 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 CLN3Q13286 438 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 HSF5Q4G112 596 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 CD276Q5ZPR3 534 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 RGS7BPQ6MZT1 257 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 TMEM179BQ7Z7N9 219 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 CALHM3Q86XJ0 350 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF502Q8TBZ5 544 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 GPX8Q8TED1 209 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ABHD3Q8WU67 409 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF799Q96GE5 643 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 PACRGQ96M98 296 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 USP22Q9UPT9 525 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF831Q5JPB2 1677 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 COL24A1Q17RW2 1714 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 B4E171 279 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 CA3P07451 260 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 CHRNA7P36544 502 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 EXT1Q16394 746 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 RTP2Q5QGT7 225 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 FAM78BQ5VT40 261 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 WDR88Q6ZMY6 472 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 LILRA2Q8N149 483 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF738Q8NE65 137 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 GALMQ96C23 342 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 TMEM56Q96MV1 263 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 RSG1Q9BU20 258 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 UBTD1Q9HAC8 227 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 PGPEP1Q9NXJ5 209 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF25P17030 456 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 DAPP51397 102 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 NOVA1P51513 510 aaKnown RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 CTSCP53634 463 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ERVS71-1P61550 626 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ELOBQ15370 118 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF750Q32MQ0 723 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 SIGIRRQ6IA17 410 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF683Q8IZ20 524 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 OR10A7Q8NGE5 316 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 OR52I2Q8NH67 350 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ASB13Q8WXK3 278 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 TBX15Q96SF7 602 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 NRSN2Q9GZP1 204 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 TRAV39A0A0B4J263 110 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 FAM181BA6NEQ2 426 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 K7ESF4 209 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF749O43361 778 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 SPRY1O43609 319 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 MEGF6O75095 1541 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 POU3F3P20264 500 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 GPX3P22352 226 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 PSMB6P28072 239 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 KCNJ3P48549 501 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 GCSAMLQ5JQS6 135 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.26□□□□□ -1.412e-8■■■■■ 27.8
BRCA1-210ENST00000471181 ARL17AQ8IVW1 177 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 ISL2Q96A47 359 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 SLAMF6Q96DU3 332 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 PELI1Q96FA3 418 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 DTD2Q96FN9 168 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 CSF3RQ99062 836 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 SEC11CQ9BY50 192 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 TMEM191AQ9H0A3 160 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 C11orf68Q9H3H3 251 aaKnown RBP6.26□□□□□ -1.41
BRCA1-210ENST00000471181 SIT1Q9Y3P8 196 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 TOGARAM1Q9Y4F4 1720 aa6.26□□□□□ -1.41
BRCA1-210ENST00000471181 A0A0A6YYJ9 748 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 A0A1W2PNR3 127 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 SHISA7A6NL88 538 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms