RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 CTBP2P56545 445 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 CLDN18P56856 261 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 CARD18P57730 90 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 FBXW4P57775 412 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 KRTAP12-2P59991 146 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 BDH1Q02338 343 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TGFBR3Q03167 851 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF763Q0D2J5 394 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 DDX39BQ13838 428 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 FASTKD3Q14CZ7 662 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 WHAMMP3Q1A5X7 153 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 EXOC3L2Q2M3D2 409 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 DCST2Q5T1A1 773 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 PRAMEF20Q5VT98 475 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 SLX4IPQ5VYV7 408 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ASPHD2Q6ICH7 369 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ATRAIDQ6UW56 229 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ANGPTL8Q6UXH0 198 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TRMT10CQ7L0Y3 403 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 COMMD6Q7Z4G1 85 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 LHFPL4Q7Z7J7 247 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 LRRTM1Q86UE6 522 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 RNF130Q86XS8 419 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 IFT20Q8IY31 132 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 OR2L13Q8N349 312 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 SLC35F6Q8N357 371 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 GTPBP8Q8N3Z3 284 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ARFGAP2Q8N6H7 521 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ZSCAN4Q8NAM6 433 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 SYT14Q8NB59 555 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 RELL2Q8NC24 303 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ADAD2Q8NCV1 583 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 OR5AU1Q8NGC0 362 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 OR4K17Q8NGC6 315 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 OR52R1Q8NGF1 315 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 OR52M1Q8NGK5 317 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 IL1F10Q8WWZ1 152 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TMEM234Q8WY98 164 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TMEM158Q8WZ71 300 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 DLX4Q92988 240 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 HGDQ93099 445 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 LHX4Q969G2 390 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 MCHR2Q969V1 340 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 PPWD1Q96BP3 646 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 SLC25A36Q96CQ1 311 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TUBGCP3Q96CW5 907 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 STARD4Q96DR4 205 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 MUCL1Q96DR8 90 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 L3HYPDHQ96EM0 354 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 C11orf24Q96F05 449 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 CNRIP1Q96F85 164 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ZBED6CLQ96FA7 236 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TPD52L3Q96J77 140 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 POM121L2Q96KW2 1035 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF681Q96N22 645 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 WFIKKN1Q96NZ8 548 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 STACQ99469 402 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 CCL19Q99731 98 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 OVOL2Q9BRP0 275 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TBL1XR1Q9BZK7 514 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 AICDAQ9GZX7 198 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 NXF5Q9H1B4 397 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 SPNS1Q9H2V7 528 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 CDC42EP4Q9H3Q1 356 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 GORASP2Q9H8Y8 452 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 EML4Q9HC35 981 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 NRN1Q9NPD7 142 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 MIEF1Q9NQG6 463 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 DCAF13Q9NV06 445 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TAS2R16Q9NYV7 291 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 MAT2BQ9NZL9 334 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 SPRR3Q9UBC9 169 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 CLCF1Q9UBD9 225 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 DKKL1Q9UK85 242 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 TRAPPC4Q9Y296 219 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 EXOGQ9Y2C4 368 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 RNF11Q9Y3C5 154 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 MAB21L2Q9Y586 359 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 ANKRD17O75179 2603 aaKnown RBP2.1□□□□□ -2.07
UBXN4-206ENST00000470687 CELSR2Q9HCU4 2923 aa2.1□□□□□ -2.07
UBXN4-206ENST00000470687 APCP25054 2843 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 MED12LQ86YW9 2145 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 CENPEQ02224 2701 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 ANKHD1Q8IWZ3 2542 aaKnown RBP2.09□□□□□ -2.07
UBXN4-206ENST00000470687 A0A0G2JN53 185 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 TRBV7-9A0A0J9YWB2 115 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 GOLGA8QA0A0J9YX86 632 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 GOLGA8OA6NCC3 632 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 RNF222A6NCQ9 220 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF724A8MTY0 619 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 MPTX1A8MV57 137 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 GOLGA8NF8WBI6 632 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 GOLGA8RI6L899 631 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 NDUFS8O00217 210 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 UPK1AO00322 258 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 SAP18O00422 153 aaKnown RBP2.09□□□□□ -2.07
UBXN4-206ENST00000470687 MANBAO00462 879 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 OR7A17O14581 309 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 FADS1O60427 444 aa2.09□□□□□ -2.07
UBXN4-206ENST00000470687 EIF4E2O60573 245 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms