RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 XRCC2O43543 280 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 ANXA2P07355 339 aaKnown RBP10.99□□□□□ -0.65
CPSF4-210ENST00000469897 MELTFP08582 738 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 DDOSTP39656 456 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 MAGEA2P43356 314 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 SLC15A1P46059 708 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 MZT1Q08AG7 82 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 METTL11BQ5VVY1 283 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 SLC16A9Q7RTY1 509 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 FAM90A1Q86YD7 464 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 PDZD9Q8IXQ8 264 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 FGFRL1Q8N441 504 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 OR2T33Q8NG76 320 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 GATAD2BQ8WXI9 593 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 LHX4Q969G2 390 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 SPSB4Q96A44 273 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 OTULINQ96BN8 352 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 FAM71F1Q96KD3 344 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-210ENST00000469897 CCL13Q99616 98 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 CNTD2Q9H8S5 307 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 MED20Q9H944 212 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 BEX1Q9HBH7 125 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 KIF17Q9P2E2 1029 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 BAIAP2Q9UQB8 552 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 MEGF8Q7Z7M0 2845 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 FAM183AA6NL82 134 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 ZNF878C9JN71 531 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 DCTN3O75935 186 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 KNG1P01042 644 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 HSD11B1P28845 292 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 CX3CR1P49238 355 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 GNGT1P63211 74 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 RELBQ01201 579 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 MS4A2Q01362 244 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 PDCD1Q15116 288 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 LINC01590Q5TEZ4 76 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 TEX36Q5VZQ5 186 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 FAM57BQ71RH2 274 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 DPY19L4Q7Z388 723 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 WDR86Q86TI4 376 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 ST8SIA4Q92187 359 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 SEH1LQ96EE3 360 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 REEP6Q96HR9 211 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 NIPSNAP1Q9BPW8 284 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 ABHD6Q9BV23 337 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 DGCR6LQ9BY27 220 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 SIRPDQ9H106 197 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 OPA3Q9H6K4 179 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 REEP1Q9H902 201 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 BRD7Q9NPI1 651 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 ACOXLQ9NUZ1 547 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 C1RLQ9NZP8 487 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 DNAJC27Q9NZQ0 273 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 ZNF319Q9P2F9 582 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 SAMHD1Q9Y3Z3 626 aaKnown RBP10.98□□□□□ -0.65
CPSF4-210ENST00000469897 MMP24Q9Y5R2 645 aa10.98□□□□□ -0.65
CPSF4-210ENST00000469897 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 A0A1B0GW55 424 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 CDIPTO14735 213 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 IFNGP01579 166 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 IGHV1-69P01742 117 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DUX4L2P0CJ85 424 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DUX4L3P0CJ86 424 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DUX4L4P0CJ87 422 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DUX4L5P0CJ88 424 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DUX4L6P0CJ89 424 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DUX4L7P0CJ90 424 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 GSTT1P30711 240 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 GRK5P34947 590 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 GSK3AP49840 483 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 MNAT1P51948 309 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 BLVRAP53004 296 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 RAG2P55895 527 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 GRB2P62993 217 aaKnown RBP10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DEFA6Q01524 100 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 TIGD6Q17RP2 521 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 MICBQ29980 383 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 GFOD2Q3B7J2 385 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 OR2T5Q6IEZ7 315 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DUX4L9Q6RFH8 374 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-210ENST00000469897 PRSS45Q7RTY3 260 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DHFR2Q86XF0 187 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 ERI1Q8IV48 349 aaKnown RBP10.97□□□□□ -0.65
CPSF4-210ENST00000469897 IQCF1Q8N6M8 205 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 OR1M1Q8NGA1 313 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 OR5T2Q8NGG2 359 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 OR6N2Q8NGY6 317 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 OR2T29Q8NH02 315 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 OR4F5Q8NH21 305 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 TBC1D15Q8TC07 691 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 LRRC29Q8WV35 223 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 INTS14Q96SY0 518 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 AMELYQ99218 206 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 MAGIXQ9H6Y5 334 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 SP140LQ9H930 580 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 RNPEPL1Q9HAU8 725 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 PDP1Q9P0J1 537 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-210ENST00000469897 KAAG1Q9UBP8 84 aa10.97□□□□□ -0.65
CPSF4-210ENST00000469897 DUX4Q9UBX2 424 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms