RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ODF4Q2M2E3 257 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 ZNF404Q494X3 552 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 ASPHD2Q6ICH7 369 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 C22orf34Q6ZV56 151 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 PAQR4Q8N4S7 273 aaPredicted RBP11□□□□□ -0.65
TRAF4-208ENST00000469529 SEMA6DQ8NFY4 1073 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 ACOT12Q8WYK0 555 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 PIGTQ969N2 578 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 FGGYQ96C11 551 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 FOXRED1Q96CU9 486 aaPredicted RBP11□□□□□ -0.65
TRAF4-208ENST00000469529 BARHL1Q9BZE3 327 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 BCL2L14Q9BZR8 327 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 NGBQ9NPG2 151 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 PLEKHB1Q9UF11 243 aaPredicted RBP11□□□□□ -0.65
TRAF4-208ENST00000469529 PMF1-BGLAPU3KQ54 211 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 PTPN13Q12923 2485 aa11□□□□□ -0.65
TRAF4-208ENST00000469529 TRAV8-7A0A075B6U6 113 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 IGHV2OR16-5A0A0B4J2B6 119 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 A0A1W2PPK0 400 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 A0A1W2PR80 420 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 SMPD2O60906 423 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 CLPXO76031 633 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 CST4P01036 141 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 THBDP07204 575 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 ERCC1P07992 297 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-208ENST00000469529 CCL2P13500 99 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 CCNOP22674 350 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 SCAND1P57086 179 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 TFF3Q07654 80 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 LSAMPQ13449 338 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 MYPOPQ86VE0 399 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-208ENST00000469529 NR2C2APQ86WQ0 139 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 ZNF101Q8IZC7 436 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 CSNK2A3Q8NEV1 391 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 SSC4DQ8WTU2 575 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 CA5BP1Q8WTZ4 195 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 HAVCR1Q96D42 359 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 ADAT3Q96EY9 351 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-208ENST00000469529 CMTM3Q96MX0 182 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 TECTBQ96PL2 329 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 PSMG3-AS1Q96PY0 264 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 SOX7Q9BT81 388 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 DCUN1D5Q9BTE7 237 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 CHST5Q9GZS9 411 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 TMEM138Q9NPI0 162 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 NDRG3Q9UGV2 375 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 SPEF1Q9Y4P9 236 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 N6AMT1Q9Y5N5 214 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 V9GY05 133 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 LRRK2Q5S007 2527 aa10.99□□□□□ -0.65
TRAF4-208ENST00000469529 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 CYSRT1A8MQ03 144 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 CRYAAP02489 173 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 CLEC2LP0C7M8 214 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 PRF1P14222 555 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 SELEP16581 610 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 ADRA2CP18825 462 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 ACKR3P25106 362 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 CAPZA1P52907 286 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 C1orf100Q5SVJ3 147 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 FAM166AQ6J272 317 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 TMEM108Q6UXF1 575 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 NKAIN3Q8N8D7 197 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 OR1M1Q8NGA1 313 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 ITLN2Q8WWU7 325 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-208ENST00000469529 AP3S1Q92572 193 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 MARS2Q96GW9 593 aaKnown RBP10.98□□□□□ -0.65
TRAF4-208ENST00000469529 FAM71F1Q96KD3 344 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-208ENST00000469529 WFIKKN1Q96NZ8 548 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 GFI1Q99684 422 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 SLC30A2Q9BRI3 323 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 TPK1Q9H3S4 243 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 NEK6Q9HC98 313 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 NPAP1Q9NZP6 1156 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 ABRACLQ9P1F3 81 aa10.98□□□□□ -0.65
TRAF4-208ENST00000469529 RTTNQ86VV8 2226 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 USP9XQ93008 2570 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-208ENST00000469529 ZNF816-ZNF321PA0A0X1KG74 233 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 A0A1B0GWJ7 208 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 WIPF3A6NGB9 483 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 AIPO00170 330 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 CLDN14O95500 239 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 ZNF20P17024 532 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 RAB3AP20336 220 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 CD40P25942 277 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 GLRXP35754 106 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 GNALP38405 381 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 PPP1CBP62140 327 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 PPP3R1P63098 170 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 NKX6-1P78426 367 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-208ENST00000469529 MXD1Q05195 221 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 CLVS2Q5SYC1 327 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 MBNL2Q5VZF2 373 aaKnown RBP10.97□□□□□ -0.65
TRAF4-208ENST00000469529 GLT8D1Q68CQ7 371 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 SFXN4Q6P4A7 337 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 FTMTQ8N4E7 242 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 DNAAF1Q8NEP3 725 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 NUP37Q8NFH4 326 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 OR2AE1Q8NHA4 323 aa10.97□□□□□ -0.65
TRAF4-208ENST00000469529 SPSB1Q96BD6 273 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms