RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ASB5Q8WWX0 329 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 C6orf62Q9GZU0 229 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-208ENST00000468300 NARFLQ9H6Q4 476 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF71Q9NQZ8 489 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-208ENST00000468300 DAPK2Q9UIK4 370 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 OR52A1Q9UKL2 312 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 PTPRQQ9UMZ3 2332 aa7.22□□□□□ -1.25
BRCA1-208ENST00000468300 A0A0A6YYJ9 748 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 OR14I1A6ND48 311 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 OR6C6A6NF89 314 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 H3BSH0 61 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 H2BFMP0C1H6 154 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 HNF1AP20823 631 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 CXADRP78310 365 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 TUSC1Q2TAM9 212 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 KLHL24Q6TFL4 600 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 CROCCP3Q8IVE0 287 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 BPIFCQ8NFQ6 507 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 SLC7A6Q92536 515 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 GMPPAQ96IJ6 420 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-208ENST00000468300 LYZL4Q96KX0 146 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 LURAP1Q96LR2 239 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 TRIB1Q96RU8 372 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 CENPMQ9NSP4 180 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 SLC5A6Q9Y289 635 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 GSTK1Q9Y2Q3 226 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 RHBDD3Q9Y3P4 386 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 URB1O60287 2271 aaKnown RBP7.21□□□□□ -1.25
BRCA1-208ENST00000468300 CACNA1GO43497 2377 aa7.21□□□□□ -1.25
BRCA1-208ENST00000468300 TMEM269A0A1B0GVZ9 245 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 AHRRA9YTQ3 701 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 TNFSF13O75888 250 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 CGAP01215 116 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 FCER2P06734 321 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 DBHP09172 617 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 CD37P11049 281 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 IGFBP3P17936 291 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SRMP19623 302 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ETV6P41212 452 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 RPL35P42766 123 aaKnown RBP7.21□□□□□ -1.26
BRCA1-208ENST00000468300 OR3A2P47893 321 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SPCS3P61009 180 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 PSG4Q00888 419 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 IFITM3Q01628 133 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 Q499Y3 187 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 PRR30Q53SZ7 412 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-208ENST00000468300 TFAP2EQ6VUC0 442 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 CCDC190Q86UF4 302 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 CPEB3Q8NE35 698 aaKnown RBP7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF75AQ96N20 296 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ATP6V0BQ99437 205 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SDHCQ99643 169 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-208ENST00000468300 PBOV1Q9GZY1 135 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 MFFQ9GZY8 342 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SLC17A5Q9NRA2 495 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 PARPBPQ9NWS1 579 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 CACNA1CQ13936 2221 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 A0A1W2PN81 502 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SERPINA3P01011 423 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ACSM4P0C7M7 580 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 CD40LGP29965 261 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 CHRNA7P36544 502 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF84P51523 738 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF121P58317 390 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-208ENST00000468300 PSMA6P60900 246 aaKnown RBP7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ARF1P84077 181 aaKnown RBP7.21□□□□□ -1.26
BRCA1-208ENST00000468300 PLA1AQ53H76 456 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 NSUN5P2Q63ZY6 315 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 Q6ZSR3 168 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 LYPD6Q86Y78 171 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 LAX1Q8IWV1 398 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SLC24A4Q8NFF2 622 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 GJC3Q8NFK1 279 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 OR8B12Q8NGG6 310 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 OR2AJ1Q8NGZ0 328 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 APH1AQ96BI3 265 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SARAFQ96BY9 339 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SPXQ9BT56 116 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ACTR6Q9GZN1 396 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 SMURF1Q9HCE7 757 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 DECR2Q9NUI1 292 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 CLEC5AQ9NY25 188 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 POU2F3Q9UKI9 436 aa7.21□□□□□ -1.26
BRCA1-208ENST00000468300 ACACAQ13085 2346 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 CASKO14936 926 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF32P17041 273 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 DYRK1AQ13627 763 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 ELFN2Q5R3F8 820 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF774Q6NX45 483 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 TMEM108Q6UXF1 575 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 GCNT2Q8N0V5 402 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 OR52M1Q8NGK5 317 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 PHYHIPQ92561 330 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 WNT2BQ93097 391 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 CITED4Q96RK1 184 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 PRRG4Q9BZD6 226 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 OR2H1Q9GZK4 316 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 NUFIP1Q9UHK0 495 aaKnown RBP7.2□□□□□ -1.26
BRCA1-208ENST00000468300 V9GYH0 126 aa7.2□□□□□ -1.26
BRCA1-208ENST00000468300 PIEZO2Q9H5I5 2752 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms